Cluster: MGYG000003152_CGC35
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003152
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003152_16 | MGYG000003152_16_6 | 4795 | 6666 | - | 1.C.39.4.5 |
| TC | MGYG000003152_16 | MGYG000003152_16_7 | 6998 | 8203 | + | 2.A.1.35.1 |
| NULL(UNKNOWN) | MGYG000003152_16 | MGYG000003152_16_8 | 8394 | 8678 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003152_16 | MGYG000003152_16_9 | 9592 | 12165 | - | 1.B.14.10.2 |
| CAZyme | MGYG000003152_16 | MGYG000003152_16_10 | 13150 | 15888 | + | GH84 |
| pfam | MGYG000003152_16 | MGYG000003152_16_11 | 16200 | 17633 | - | DUF4832 | DUF4874 |
| CAZyme | MGYG000003152_16 | MGYG000003152_16_12 | 17657 | 19258 | - | GH31_19 |
| TF | MGYG000003152_16 | MGYG000003152_16_13 | 19314 | 23423 | - | HTH_AraC |
| pfam | MGYG000003152_16 | MGYG000003152_16_14 | 23602 | 24699 | - | DUF5017 |
| TC | MGYG000003152_16 | MGYG000003152_16_15 | 24754 | 26547 | - | 8.A.46.1.3 |
| TC | MGYG000003152_16 | MGYG000003152_16_16 | 26587 | 29634 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | MGYG000003152_16 | MGYG000003152_16_17 | 29735 | 30190 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000003152_16 | MGYG000003152_16_18 | 30397 | 31086 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003152_16 | MGYG000003152_16_19 | 31125 | 33107 | + | 3.D.10.1.5 |
| TC | MGYG000003152_16 | MGYG000003152_16_20 | 33242 | 34000 | + | 3.D.10.1.5 |
| TC | MGYG000003152_16 | MGYG000003152_16_21 | 34530 | 37109 | - | 1.C.105.2.12 |
Gene ID: MGYG000003152_16_6
Type: TC
Location: 4795 - 6666 (-)
Type: TC
Location: 4795 - 6666 (-)
Gene ID: MGYG000003152_16_7
Type: TC
Location: 6998 - 8203 (+)
Type: TC
Location: 6998 - 8203 (+)
Gene ID: MGYG000003152_16_8
Type:
Location: 8394 - 8678 (-)
Type:
Location: 8394 - 8678 (-)
Gene ID: MGYG000003152_16_9
Type: TC
Location: 9592 - 12165 (-)
Type: TC
Location: 9592 - 12165 (-)
Gene ID: MGYG000003152_16_10
Type: CAZyme
Location: 13150 - 15888 (+)
Type: CAZyme
Location: 13150 - 15888 (+)
Gene ID: MGYG000003152_16_11
Type: pfam
Location: 16200 - 17633 (-)
Type: pfam
Location: 16200 - 17633 (-)
Gene ID: MGYG000003152_16_12
Type: CAZyme
Location: 17657 - 19258 (-)
Type: CAZyme
Location: 17657 - 19258 (-)
Gene ID: MGYG000003152_16_13
Type: TF
Location: 19314 - 23423 (-)
Type: TF
Location: 19314 - 23423 (-)
Gene ID: MGYG000003152_16_14
Type: pfam
Location: 23602 - 24699 (-)
Type: pfam
Location: 23602 - 24699 (-)
Gene ID: MGYG000003152_16_15
Type: TC
Location: 24754 - 26547 (-)
Type: TC
Location: 24754 - 26547 (-)
Gene ID: MGYG000003152_16_16
Type: TC
Location: 26587 - 29634 (-)
Type: TC
Location: 26587 - 29634 (-)
Gene ID: MGYG000003152_16_17
Type:
Location: 29735 - 30190 (+)
Type:
Location: 29735 - 30190 (+)
Gene ID: MGYG000003152_16_18
Type:
Location: 30397 - 31086 (+)
Type:
Location: 30397 - 31086 (+)
Gene ID: MGYG000003152_16_19
Type: TC
Location: 31125 - 33107 (+)
Type: TC
Location: 31125 - 33107 (+)
Gene ID: MGYG000003152_16_20
Type: TC
Location: 33242 - 34000 (+)
Type: TC
Location: 33242 - 34000 (+)
Gene ID: MGYG000003152_16_21
Type: TC
Location: 34530 - 37109 (-)
Type: TC
Location: 34530 - 37109 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella denticola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.