Cluster: MGYG000003152_CGC3
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 4
- Substrate: fructan
- Genome ID: MGYG000003152
- CGC Family ID: CGCFAM_00017
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003152_2 | MGYG000003152_2_20 | 27193 | 30246 | + | 1.B.14.6.1 |
| TC | MGYG000003152_2 | MGYG000003152_2_21 | 30270 | 31925 | + | 8.A.46.1.5 |
| pfam | MGYG000003152_2 | MGYG000003152_2_22 | 32103 | 33287 | + | DUF4960 |
| CAZyme | MGYG000003152_2 | MGYG000003152_2_23 | 33416 | 36517 | + | GH32 |
| TF | MGYG000003152_2 | MGYG000003152_2_24 | 36704 | 38854 | + | HTH_AraC | HTH_AraC |
| TC | MGYG000003152_2 | MGYG000003152_2_25 | 39078 | 42179 | + | 1.B.14.6.1 |
| pfam | MGYG000003152_2 | MGYG000003152_2_26 | 42388 | 44121 | + | SusD_RagB | SusD-like_3 |
| pfam | MGYG000003152_2 | MGYG000003152_2_27 | 44115 | 45509 | + | DUF4960 | DUF5018 |
| CAZyme | MGYG000003152_2 | MGYG000003152_2_28 | 45527 | 47122 | + | GH32 |
| CAZyme | MGYG000003152_2 | MGYG000003152_2_29 | 47436 | 49124 | + | GH32 |
| TC | MGYG000003152_2 | MGYG000003152_2_30 | 49354 | 50511 | + | 2.A.1.7.17 |
| STP | MGYG000003152_2 | MGYG000003152_2_31 | 50519 | 51400 | + | PfkB |
| NULL(UNKNOWN) | MGYG000003152_2 | MGYG000003152_2_32 | 51694 | 51867 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003152_2 | MGYG000003152_2_33 | 52133 | 54271 | + | GH97 |
Gene ID: MGYG000003152_2_20
Type: TC
Location: 27193 - 30246 (+)
Type: TC
Location: 27193 - 30246 (+)
Gene ID: MGYG000003152_2_21
Type: TC
Location: 30270 - 31925 (+)
Type: TC
Location: 30270 - 31925 (+)
Gene ID: MGYG000003152_2_22
Type: pfam
Location: 32103 - 33287 (+)
Type: pfam
Location: 32103 - 33287 (+)
Gene ID: MGYG000003152_2_23
Type: CAZyme
Location: 33416 - 36517 (+)
Type: CAZyme
Location: 33416 - 36517 (+)
Gene ID: MGYG000003152_2_24
Type: TF
Location: 36704 - 38854 (+)
Type: TF
Location: 36704 - 38854 (+)
Gene ID: MGYG000003152_2_25
Type: TC
Location: 39078 - 42179 (+)
Type: TC
Location: 39078 - 42179 (+)
Gene ID: MGYG000003152_2_26
Type: pfam
Location: 42388 - 44121 (+)
Type: pfam
Location: 42388 - 44121 (+)
Gene ID: MGYG000003152_2_27
Type: pfam
Location: 44115 - 45509 (+)
Type: pfam
Location: 44115 - 45509 (+)
Gene ID: MGYG000003152_2_28
Type: CAZyme
Location: 45527 - 47122 (+)
Type: CAZyme
Location: 45527 - 47122 (+)
Gene ID: MGYG000003152_2_29
Type: CAZyme
Location: 47436 - 49124 (+)
Type: CAZyme
Location: 47436 - 49124 (+)
Gene ID: MGYG000003152_2_30
Type: TC
Location: 49354 - 50511 (+)
Type: TC
Location: 49354 - 50511 (+)
Gene ID: MGYG000003152_2_31
Type: STP
Location: 50519 - 51400 (+)
Type: STP
Location: 50519 - 51400 (+)
Gene ID: MGYG000003152_2_32
Type:
Location: 51694 - 51867 (+)
Type:
Location: 51694 - 51867 (+)
Gene ID: MGYG000003152_2_33
Type: CAZyme
Location: 52133 - 54271 (+)
Type: CAZyme
Location: 52133 - 54271 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella denticola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.