Cluster: MGYG000003144_CGC9
🧬 Cluster Details
- Gene Count: 21
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003144
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003144_2 | MGYG000003144_2_109 | 140594 | 141268 | - | 9.B.100.1.1 |
| TF | MGYG000003144_2 | MGYG000003144_2_110 | 141464 | 142507 | + | 0037176 |
| TC | MGYG000003144_2 | MGYG000003144_2_111 | 142679 | 144274 | + | 3.A.1.5.5 |
| TC | MGYG000003144_2 | MGYG000003144_2_112 | 144351 | 145310 | + | 3.A.1.5.5 |
| TC | MGYG000003144_2 | MGYG000003144_2_113 | 145625 | 146518 | + | 3.A.1.5.42 |
| TC | MGYG000003144_2 | MGYG000003144_2_114 | 146639 | 147637 | + | 3.A.1.5.5 |
| TC | MGYG000003144_2 | MGYG000003144_2_115 | 147873 | 148658 | + | 3.A.1.5.42 |
| pfam | MGYG000003144_2 | MGYG000003144_2_116 | 148804 | 149562 | - | MiaE |
| TF | MGYG000003144_2 | MGYG000003144_2_117 | 149691 | 150701 | - | LacI |
| TC | MGYG000003144_2 | MGYG000003144_2_118 | 150955 | 152409 | + | 4.A.1.2.3 |
| CAZyme | MGYG000003144_2 | MGYG000003144_2_119 | 152441 | 153871 | + | GH1 |
| STP | MGYG000003144_2 | MGYG000003144_2_120 | 153977 | 155497 | - | Pribosyltran |
| TC | MGYG000003144_2 | MGYG000003144_2_121 | 155516 | 156007 | - | 9.B.160.1.8 |
| pfam | MGYG000003144_2 | MGYG000003144_2_122 | 156195 | 157490 | - | tRNA-synt_2b | Seryl_tRNA_N |
| STP | MGYG000003144_2 | MGYG000003144_2_123 | 157779 | 159116 | - | AAA |
| TC | MGYG000003144_2 | MGYG000003144_2_124 | 159269 | 159889 | - | 1.B.46.1.2 |
| TC | MGYG000003144_2 | MGYG000003144_2_125 | 159957 | 162461 | - | 3.A.12.1.2 |
| TF | MGYG000003144_2 | MGYG000003144_2_126 | 162654 | 163145 | - | 0040517 |
| TC | MGYG000003144_2 | MGYG000003144_2_127 | 163296 | 164411 | + | 3.D.2.2.1 |
| STP | MGYG000003144_2 | MGYG000003144_2_128 | 164595 | 165545 | + | Pyr_redox_2 |
| TC | MGYG000003144_2 | MGYG000003144_2_129 | 165602 | 166843 | + | 9.B.34.1.2 |
Gene ID: MGYG000003144_2_109
Type: TC
Location: 140594 - 141268 (-)
Type: TC
Location: 140594 - 141268 (-)
Gene ID: MGYG000003144_2_110
Type: TF
Location: 141464 - 142507 (+)
Type: TF
Location: 141464 - 142507 (+)
Gene ID: MGYG000003144_2_111
Type: TC
Location: 142679 - 144274 (+)
Type: TC
Location: 142679 - 144274 (+)
Gene ID: MGYG000003144_2_112
Type: TC
Location: 144351 - 145310 (+)
Type: TC
Location: 144351 - 145310 (+)
Gene ID: MGYG000003144_2_113
Type: TC
Location: 145625 - 146518 (+)
Type: TC
Location: 145625 - 146518 (+)
Gene ID: MGYG000003144_2_114
Type: TC
Location: 146639 - 147637 (+)
Type: TC
Location: 146639 - 147637 (+)
Gene ID: MGYG000003144_2_115
Type: TC
Location: 147873 - 148658 (+)
Type: TC
Location: 147873 - 148658 (+)
Gene ID: MGYG000003144_2_116
Type: pfam
Location: 148804 - 149562 (-)
Type: pfam
Location: 148804 - 149562 (-)
Gene ID: MGYG000003144_2_117
Type: TF
Location: 149691 - 150701 (-)
Type: TF
Location: 149691 - 150701 (-)
Gene ID: MGYG000003144_2_118
Type: TC
Location: 150955 - 152409 (+)
Type: TC
Location: 150955 - 152409 (+)
Gene ID: MGYG000003144_2_119
Type: CAZyme
Location: 152441 - 153871 (+)
Type: CAZyme
Location: 152441 - 153871 (+)
Gene ID: MGYG000003144_2_120
Type: STP
Location: 153977 - 155497 (-)
Type: STP
Location: 153977 - 155497 (-)
Gene ID: MGYG000003144_2_121
Type: TC
Location: 155516 - 156007 (-)
Type: TC
Location: 155516 - 156007 (-)
Gene ID: MGYG000003144_2_122
Type: pfam
Location: 156195 - 157490 (-)
Type: pfam
Location: 156195 - 157490 (-)
Gene ID: MGYG000003144_2_123
Type: STP
Location: 157779 - 159116 (-)
Type: STP
Location: 157779 - 159116 (-)
Gene ID: MGYG000003144_2_124
Type: TC
Location: 159269 - 159889 (-)
Type: TC
Location: 159269 - 159889 (-)
Gene ID: MGYG000003144_2_125
Type: TC
Location: 159957 - 162461 (-)
Type: TC
Location: 159957 - 162461 (-)
Gene ID: MGYG000003144_2_126
Type: TF
Location: 162654 - 163145 (-)
Type: TF
Location: 162654 - 163145 (-)
Gene ID: MGYG000003144_2_127
Type: TC
Location: 163296 - 164411 (+)
Type: TC
Location: 163296 - 164411 (+)
Gene ID: MGYG000003144_2_128
Type: STP
Location: 164595 - 165545 (+)
Type: STP
Location: 164595 - 165545 (+)
Gene ID: MGYG000003144_2_129
Type: TC
Location: 165602 - 166843 (+)
Type: TC
Location: 165602 - 166843 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Aeromonadaceae
Genus
Aeromonas
Species
Aeromonas rivipollensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.