Cluster: MGYG000003144_CGC45
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003144
- CGC Family ID: CGCFAM_10923
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003144_18 | MGYG000003144_18_27 | 26255 | 27406 | - | GH102 |
| pfam | MGYG000003144_18 | MGYG000003144_18_28 | 27557 | 27808 | + | DUF1289 |
| TC | MGYG000003144_18 | MGYG000003144_18_29 | 27893 | 29629 | - | 4.A.2.1.17 |
| STP | MGYG000003144_18 | MGYG000003144_18_30 | 29626 | 30615 | - | PfkB |
| TC | MGYG000003144_18 | MGYG000003144_18_31 | 30615 | 31715 | - | 4.A.2.1.1 |
| TF | MGYG000003144_18 | MGYG000003144_18_32 | 32022 | 33020 | + | LacI |
| TC | MGYG000003144_18 | MGYG000003144_18_33 | 33324 | 34517 | + | 2.A.42.1.1 |
Gene ID: MGYG000003144_18_27
Type: CAZyme
Location: 26255 - 27406 (-)
Type: CAZyme
Location: 26255 - 27406 (-)
Gene ID: MGYG000003144_18_28
Type: pfam
Location: 27557 - 27808 (+)
Type: pfam
Location: 27557 - 27808 (+)
Gene ID: MGYG000003144_18_29
Type: TC
Location: 27893 - 29629 (-)
Type: TC
Location: 27893 - 29629 (-)
Gene ID: MGYG000003144_18_30
Type: STP
Location: 29626 - 30615 (-)
Type: STP
Location: 29626 - 30615 (-)
Gene ID: MGYG000003144_18_31
Type: TC
Location: 30615 - 31715 (-)
Type: TC
Location: 30615 - 31715 (-)
Gene ID: MGYG000003144_18_32
Type: TF
Location: 32022 - 33020 (+)
Type: TF
Location: 32022 - 33020 (+)
Gene ID: MGYG000003144_18_33
Type: TC
Location: 33324 - 34517 (+)
Type: TC
Location: 33324 - 34517 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Aeromonadaceae
Genus
Aeromonas
Species
Aeromonas rivipollensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.