Cluster: MGYG000003144_CGC4
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003144
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003144_1 | MGYG000003144_1_371 | 427610 | 428770 | + | 9.B.34.1.4 |
| pfam | MGYG000003144_1 | MGYG000003144_1_372 | 428810 | 429694 | - | NAD_kinase | NAD_kinase_C |
| pfam | MGYG000003144_1 | MGYG000003144_1_373 | 429959 | 430534 | + | GrpE |
| TC | MGYG000003144_1 | MGYG000003144_1_374 | 430869 | 432794 | + | 1.A.33.1.2 |
| TC | MGYG000003144_1 | MGYG000003144_1_375 | 432907 | 434034 | + | 3.A.5.8.1 |
| TC | MGYG000003144_1 | MGYG000003144_1_376 | 434303 | 435787 | + | 1.B.3.1.2 |
| STP | MGYG000003144_1 | MGYG000003144_1_377 | 435903 | 436859 | + | PfkB |
| TC | MGYG000003144_1 | MGYG000003144_1_378 | 436942 | 438306 | + | 4.A.1.2.1 |
| CAZyme | MGYG000003144_1 | MGYG000003144_1_379 | 438306 | 439721 | + | GH32 |
| TF | MGYG000003144_1 | MGYG000003144_1_380 | 439749 | 440759 | + | LacI |
| TC | MGYG000003144_1 | MGYG000003144_1_381 | 440832 | 441560 | - | 9.B.20.1.1 |
| NULL(UNKNOWN) | MGYG000003144_1 | MGYG000003144_1_382 | 441791 | 442156 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003144_1 | MGYG000003144_1_383 | 442934 | 443347 | + | 9.B.102.5.2 |
| TC | MGYG000003144_1 | MGYG000003144_1_384 | 443361 | 443807 | + | 9.B.102.5.5 |
| pfam | MGYG000003144_1 | MGYG000003144_1_385 | 444054 | 445193 | + | HlyD_3 | Biotin_lipoyl_2 | HlyD_D23 |
| TC | MGYG000003144_1 | MGYG000003144_1_386 | 445186 | 445875 | + | 3.A.1.125.1 |
| TC | MGYG000003144_1 | MGYG000003144_1_387 | 445876 | 447090 | + | 3.A.1.122.2 |
| TC | MGYG000003144_1 | MGYG000003144_1_388 | 447090 | 448289 | + | 3.A.1.122.1 |
| TC | MGYG000003144_1 | MGYG000003144_1_389 | 448286 | 450820 | - | 9.B.34.1.3 |
Gene ID: MGYG000003144_1_371
Type: TC
Location: 427610 - 428770 (+)
Type: TC
Location: 427610 - 428770 (+)
Gene ID: MGYG000003144_1_372
Type: pfam
Location: 428810 - 429694 (-)
Type: pfam
Location: 428810 - 429694 (-)
Gene ID: MGYG000003144_1_373
Type: pfam
Location: 429959 - 430534 (+)
Type: pfam
Location: 429959 - 430534 (+)
Gene ID: MGYG000003144_1_374
Type: TC
Location: 430869 - 432794 (+)
Type: TC
Location: 430869 - 432794 (+)
Gene ID: MGYG000003144_1_375
Type: TC
Location: 432907 - 434034 (+)
Type: TC
Location: 432907 - 434034 (+)
Gene ID: MGYG000003144_1_376
Type: TC
Location: 434303 - 435787 (+)
Type: TC
Location: 434303 - 435787 (+)
Gene ID: MGYG000003144_1_377
Type: STP
Location: 435903 - 436859 (+)
Type: STP
Location: 435903 - 436859 (+)
Gene ID: MGYG000003144_1_378
Type: TC
Location: 436942 - 438306 (+)
Type: TC
Location: 436942 - 438306 (+)
Gene ID: MGYG000003144_1_379
Type: CAZyme
Location: 438306 - 439721 (+)
Type: CAZyme
Location: 438306 - 439721 (+)
Gene ID: MGYG000003144_1_380
Type: TF
Location: 439749 - 440759 (+)
Type: TF
Location: 439749 - 440759 (+)
Gene ID: MGYG000003144_1_381
Type: TC
Location: 440832 - 441560 (-)
Type: TC
Location: 440832 - 441560 (-)
Gene ID: MGYG000003144_1_382
Type:
Location: 441791 - 442156 (-)
Type:
Location: 441791 - 442156 (-)
Gene ID: MGYG000003144_1_383
Type: TC
Location: 442934 - 443347 (+)
Type: TC
Location: 442934 - 443347 (+)
Gene ID: MGYG000003144_1_384
Type: TC
Location: 443361 - 443807 (+)
Type: TC
Location: 443361 - 443807 (+)
Gene ID: MGYG000003144_1_385
Type: pfam
Location: 444054 - 445193 (+)
Type: pfam
Location: 444054 - 445193 (+)
Gene ID: MGYG000003144_1_386
Type: TC
Location: 445186 - 445875 (+)
Type: TC
Location: 445186 - 445875 (+)
Gene ID: MGYG000003144_1_387
Type: TC
Location: 445876 - 447090 (+)
Type: TC
Location: 445876 - 447090 (+)
Gene ID: MGYG000003144_1_388
Type: TC
Location: 447090 - 448289 (+)
Type: TC
Location: 447090 - 448289 (+)
Gene ID: MGYG000003144_1_389
Type: TC
Location: 448286 - 450820 (-)
Type: TC
Location: 448286 - 450820 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Aeromonadaceae
Genus
Aeromonas
Species
Aeromonas rivipollensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.