Cluster: MGYG000003142_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003142
- CGC Family ID: CGCFAM_00222
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003142_16 | MGYG000003142_16_22 | 23754 | 25316 | + | CBM50 |
| pfam | MGYG000003142_16 | MGYG000003142_16_23 | 25546 | 26391 | + | GHMP_kinases_N | GHMP_kinases_C |
| NULL(UNKNOWN) | MGYG000003142_16 | MGYG000003142_16_24 | 26735 | 26932 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003142_16 | MGYG000003142_16_25 | 26952 | 28412 | + | 9.A.11.1.2 |
Gene ID: MGYG000003142_16_22
Type: CAZyme
Location: 23754 - 25316 (+)
Type: CAZyme
Location: 23754 - 25316 (+)
Gene ID: MGYG000003142_16_23
Type: pfam
Location: 25546 - 26391 (+)
Type: pfam
Location: 25546 - 26391 (+)
Gene ID: MGYG000003142_16_24
Type:
Location: 26735 - 26932 (+)
Type:
Location: 26735 - 26932 (+)
Gene ID: MGYG000003142_16_25
Type: TC
Location: 26952 - 28412 (+)
Type: TC
Location: 26952 - 28412 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium_J
Species
Clostridium_J faecium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.