Cluster: MGYG000003142_CGC6
🧬 Cluster Details
- Gene Count: 27
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003142
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003142_6 | MGYG000003142_6_171 | 175027 | 176466 | - | 2.A.3.7.2 |
| TC | MGYG000003142_6 | MGYG000003142_6_172 | 176997 | 178319 | + | 2.A.3.8.12 |
| peptidase | MGYG000003142_6 | MGYG000003142_6_173 | 178399 | 179649 | - | M24.UPB |
| pfam | MGYG000003142_6 | MGYG000003142_6_174 | 179912 | 180241 | - | Thioredoxin |
| TC | MGYG000003142_6 | MGYG000003142_6_175 | 180523 | 181335 | + | 3.A.1.3.27 |
| TC | MGYG000003142_6 | MGYG000003142_6_176 | 181373 | 182029 | + | 3.A.1.3.15 |
| TC | MGYG000003142_6 | MGYG000003142_6_177 | 182016 | 182738 | + | 3.A.1.3.15 |
| TC | MGYG000003142_6 | MGYG000003142_6_178 | 182892 | 183800 | + | 3.A.1.144.2 |
| TC | MGYG000003142_6 | MGYG000003142_6_179 | 183793 | 184587 | + | 3.A.1.144.1 |
| STP | MGYG000003142_6 | MGYG000003142_6_180 | 184778 | 185473 | + | NIR_SIR | NIR_SIR_ferr |
| TC | MGYG000003142_6 | MGYG000003142_6_181 | 185574 | 187502 | - | 3.A.1.134.12 |
| pfam | MGYG000003142_6 | MGYG000003142_6_182 | 187696 | 188190 | - | AhpC-TSA | Redoxin |
| CAZyme | MGYG000003142_6 | MGYG000003142_6_183 | 188235 | 189485 | - | GH3 |
| NULL(UNKNOWN) | MGYG000003142_6 | MGYG000003142_6_184 | 190278 | 190373 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003142_6 | MGYG000003142_6_185 | 191325 | 193046 | - | 8.A.7.1.1 |
| sulfatase | MGYG000003142_6 | MGYG000003142_6_186 | 193150 | 193881 | - | S1_9 |
| CAZyme | MGYG000003142_6 | MGYG000003142_6_187 | 193885 | 195033 | - | CE9 |
| CAZyme | MGYG000003142_6 | MGYG000003142_6_188 | 195065 | 196147 | - | GH170 |
| TC | MGYG000003142_6 | MGYG000003142_6_189 | 196169 | 196465 | - | 4.A.3.2.8 |
| CAZyme | MGYG000003142_6 | MGYG000003142_6_190 | 196479 | 197891 | - | GH4 |
| TC | MGYG000003142_6 | MGYG000003142_6_191 | 197907 | 199211 | - | 4.A.3.2.8 |
| TC | MGYG000003142_6 | MGYG000003142_6_192 | 199248 | 199550 | - | 4.A.3.2.8 |
| pfam | MGYG000003142_6 | MGYG000003142_6_193 | 199566 | 200474 | - | BcrAD_BadFG |
| TC | MGYG000003142_6 | MGYG000003142_6_194 | 200508 | 200774 | - | 8.A.8.1.1 |
| TF | MGYG000003142_6 | MGYG000003142_6_195 | 201054 | 203747 | - | 0043095 |
| TC | MGYG000003142_6 | MGYG000003142_6_196 | 204057 | 205790 | - | 3.A.1.21.1 |
| TC | MGYG000003142_6 | MGYG000003142_6_197 | 205787 | 207595 | - | 3.A.1.21.1 |
Gene ID: MGYG000003142_6_171
Type: TC
Location: 175027 - 176466 (-)
Type: TC
Location: 175027 - 176466 (-)
Gene ID: MGYG000003142_6_172
Type: TC
Location: 176997 - 178319 (+)
Type: TC
Location: 176997 - 178319 (+)
Gene ID: MGYG000003142_6_173
Type: peptidase
Location: 178399 - 179649 (-)
Type: peptidase
Location: 178399 - 179649 (-)
Gene ID: MGYG000003142_6_174
Type: pfam
Location: 179912 - 180241 (-)
Type: pfam
Location: 179912 - 180241 (-)
Gene ID: MGYG000003142_6_175
Type: TC
Location: 180523 - 181335 (+)
Type: TC
Location: 180523 - 181335 (+)
Gene ID: MGYG000003142_6_176
Type: TC
Location: 181373 - 182029 (+)
Type: TC
Location: 181373 - 182029 (+)
Gene ID: MGYG000003142_6_177
Type: TC
Location: 182016 - 182738 (+)
Type: TC
Location: 182016 - 182738 (+)
Gene ID: MGYG000003142_6_178
Type: TC
Location: 182892 - 183800 (+)
Type: TC
Location: 182892 - 183800 (+)
Gene ID: MGYG000003142_6_179
Type: TC
Location: 183793 - 184587 (+)
Type: TC
Location: 183793 - 184587 (+)
Gene ID: MGYG000003142_6_180
Type: STP
Location: 184778 - 185473 (+)
Type: STP
Location: 184778 - 185473 (+)
Gene ID: MGYG000003142_6_181
Type: TC
Location: 185574 - 187502 (-)
Type: TC
Location: 185574 - 187502 (-)
Gene ID: MGYG000003142_6_182
Type: pfam
Location: 187696 - 188190 (-)
Type: pfam
Location: 187696 - 188190 (-)
Gene ID: MGYG000003142_6_183
Type: CAZyme
Location: 188235 - 189485 (-)
Type: CAZyme
Location: 188235 - 189485 (-)
Gene ID: MGYG000003142_6_184
Type:
Location: 190278 - 190373 (+)
Type:
Location: 190278 - 190373 (+)
Gene ID: MGYG000003142_6_185
Type: TC
Location: 191325 - 193046 (-)
Type: TC
Location: 191325 - 193046 (-)
Gene ID: MGYG000003142_6_186
Type: sulfatase
Location: 193150 - 193881 (-)
Type: sulfatase
Location: 193150 - 193881 (-)
Gene ID: MGYG000003142_6_187
Type: CAZyme
Location: 193885 - 195033 (-)
Type: CAZyme
Location: 193885 - 195033 (-)
Gene ID: MGYG000003142_6_188
Type: CAZyme
Location: 195065 - 196147 (-)
Type: CAZyme
Location: 195065 - 196147 (-)
Gene ID: MGYG000003142_6_189
Type: TC
Location: 196169 - 196465 (-)
Type: TC
Location: 196169 - 196465 (-)
Gene ID: MGYG000003142_6_190
Type: CAZyme
Location: 196479 - 197891 (-)
Type: CAZyme
Location: 196479 - 197891 (-)
Gene ID: MGYG000003142_6_191
Type: TC
Location: 197907 - 199211 (-)
Type: TC
Location: 197907 - 199211 (-)
Gene ID: MGYG000003142_6_192
Type: TC
Location: 199248 - 199550 (-)
Type: TC
Location: 199248 - 199550 (-)
Gene ID: MGYG000003142_6_193
Type: pfam
Location: 199566 - 200474 (-)
Type: pfam
Location: 199566 - 200474 (-)
Gene ID: MGYG000003142_6_194
Type: TC
Location: 200508 - 200774 (-)
Type: TC
Location: 200508 - 200774 (-)
Gene ID: MGYG000003142_6_195
Type: TF
Location: 201054 - 203747 (-)
Type: TF
Location: 201054 - 203747 (-)
Gene ID: MGYG000003142_6_196
Type: TC
Location: 204057 - 205790 (-)
Type: TC
Location: 204057 - 205790 (-)
Gene ID: MGYG000003142_6_197
Type: TC
Location: 205787 - 207595 (-)
Type: TC
Location: 205787 - 207595 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium_J
Species
Clostridium_J faecium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.