Cluster: MGYG000003142_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003142
- CGC Family ID: CGCFAM_01101
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003142_20 | MGYG000003142_20_47 | 56197 | 57933 | - | 1.B.52.2.1 |
| CAZyme | MGYG000003142_20 | MGYG000003142_20_48 | 58430 | 59500 | - | GH18 |
| pfam | MGYG000003142_20 | MGYG000003142_20_49 | 59521 | 61299 | - | Polysacc_deac_1 |
| CAZyme | MGYG000003142_20 | MGYG000003142_20_50 | 61469 | 63346 | - | GT2 |
| CAZyme | MGYG000003142_20 | MGYG000003142_20_51 | 63462 | 64910 | - | CE4 | CE4 |
Gene ID: MGYG000003142_20_47
Type: TC
Location: 56197 - 57933 (-)
Type: TC
Location: 56197 - 57933 (-)
Gene ID: MGYG000003142_20_48
Type: CAZyme
Location: 58430 - 59500 (-)
Type: CAZyme
Location: 58430 - 59500 (-)
Gene ID: MGYG000003142_20_49
Type: pfam
Location: 59521 - 61299 (-)
Type: pfam
Location: 59521 - 61299 (-)
Gene ID: MGYG000003142_20_50
Type: CAZyme
Location: 61469 - 63346 (-)
Type: CAZyme
Location: 61469 - 63346 (-)
Gene ID: MGYG000003142_20_51
Type: CAZyme
Location: 63462 - 64910 (-)
Type: CAZyme
Location: 63462 - 64910 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium_J
Species
Clostridium_J faecium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.