Cluster: MGYG000003142_CGC1
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000003142
- CGC Family ID: CGCFAM_00684
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003142_1 | MGYG000003142_1_149 | 164344 | 166224 | + | 9.B.18.2.1 |
| pfam | MGYG000003142_1 | MGYG000003142_1_150 | 166250 | 167353 | + | Aminotran_5 | DegT_DnrJ_EryC1 | Cys_Met_Meta_PP | Beta_elim_lyase |
| pfam | MGYG000003142_1 | MGYG000003142_1_151 | 167400 | 168719 | + | UDPG_MGDP_dh | NAD_binding_2 | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| CAZyme | MGYG000003142_1 | MGYG000003142_1_152 | 168841 | 169947 | + | GH177 |
| pfam | MGYG000003142_1 | MGYG000003142_1_153 | 169969 | 170709 | + | Hexapep | Hexapep | Hexapep | Hexapep_2 | Hexapep_2 |
| CAZyme | MGYG000003142_1 | MGYG000003142_1_154 | 170820 | 171923 | + | GT4 |
| CAZyme | MGYG000003142_1 | MGYG000003142_1_155 | 171942 | 173117 | + | GT4 |
| CAZyme | MGYG000003142_1 | MGYG000003142_1_156 | 173147 | 174181 | + | GT2 |
| pfam | MGYG000003142_1 | MGYG000003142_1_157 | 174463 | 175704 | + | Wzy_C |
| TC | MGYG000003142_1 | MGYG000003142_1_158 | 175853 | 176506 | + | 9.B.18.1.2 |
| CAZyme | MGYG000003142_1 | MGYG000003142_1_159 | 176519 | 177226 | + | GT26 |
| CAZyme | MGYG000003142_1 | MGYG000003142_1_160 | 177445 | 178554 | + | GT4 |
Gene ID: MGYG000003142_1_149
Type: TC
Location: 164344 - 166224 (+)
Type: TC
Location: 164344 - 166224 (+)
Gene ID: MGYG000003142_1_150
Type: pfam
Location: 166250 - 167353 (+)
Type: pfam
Location: 166250 - 167353 (+)
Gene ID: MGYG000003142_1_151
Type: pfam
Location: 167400 - 168719 (+)
Type: pfam
Location: 167400 - 168719 (+)
Gene ID: MGYG000003142_1_152
Type: CAZyme
Location: 168841 - 169947 (+)
Type: CAZyme
Location: 168841 - 169947 (+)
Gene ID: MGYG000003142_1_153
Type: pfam
Location: 169969 - 170709 (+)
Type: pfam
Location: 169969 - 170709 (+)
Gene ID: MGYG000003142_1_154
Type: CAZyme
Location: 170820 - 171923 (+)
Type: CAZyme
Location: 170820 - 171923 (+)
Gene ID: MGYG000003142_1_155
Type: CAZyme
Location: 171942 - 173117 (+)
Type: CAZyme
Location: 171942 - 173117 (+)
Gene ID: MGYG000003142_1_156
Type: CAZyme
Location: 173147 - 174181 (+)
Type: CAZyme
Location: 173147 - 174181 (+)
Gene ID: MGYG000003142_1_157
Type: pfam
Location: 174463 - 175704 (+)
Type: pfam
Location: 174463 - 175704 (+)
Gene ID: MGYG000003142_1_158
Type: TC
Location: 175853 - 176506 (+)
Type: TC
Location: 175853 - 176506 (+)
Gene ID: MGYG000003142_1_159
Type: CAZyme
Location: 176519 - 177226 (+)
Type: CAZyme
Location: 176519 - 177226 (+)
Gene ID: MGYG000003142_1_160
Type: CAZyme
Location: 177445 - 178554 (+)
Type: CAZyme
Location: 177445 - 178554 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium_J
Species
Clostridium_J faecium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.