Cluster: MGYG000003139_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003139
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003139_9 | MGYG000003139_9_48 | 48877 | 50289 | - | 2.A.50.2.1 |
| pfam | MGYG000003139_9 | MGYG000003139_9_49 | 50335 | 50823 | - | DUF4358 |
| pfam | MGYG000003139_9 | MGYG000003139_9_50 | 50837 | 51649 | - | Lipase_GDSL | Lipase_GDSL_2 |
| CAZyme | MGYG000003139_9 | MGYG000003139_9_51 | 51928 | 53199 | + | CBM50 |
| pfam | MGYG000003139_9 | MGYG000003139_9_52 | 53364 | 53777 | + | LMWPc |
| pfam | MGYG000003139_9 | MGYG000003139_9_53 | 54030 | 55313 | + | SDH_alpha |
| TC | MGYG000003139_9 | MGYG000003139_9_54 | 55340 | 56527 | + | 2.A.23.2.2 |
Gene ID: MGYG000003139_9_48
Type: TC
Location: 48877 - 50289 (-)
Type: TC
Location: 48877 - 50289 (-)
Gene ID: MGYG000003139_9_49
Type: pfam
Location: 50335 - 50823 (-)
Type: pfam
Location: 50335 - 50823 (-)
Gene ID: MGYG000003139_9_50
Type: pfam
Location: 50837 - 51649 (-)
Type: pfam
Location: 50837 - 51649 (-)
Gene ID: MGYG000003139_9_51
Type: CAZyme
Location: 51928 - 53199 (+)
Type: CAZyme
Location: 51928 - 53199 (+)
Gene ID: MGYG000003139_9_52
Type: pfam
Location: 53364 - 53777 (+)
Type: pfam
Location: 53364 - 53777 (+)
Gene ID: MGYG000003139_9_53
Type: pfam
Location: 54030 - 55313 (+)
Type: pfam
Location: 54030 - 55313 (+)
Gene ID: MGYG000003139_9_54
Type: TC
Location: 55340 - 56527 (+)
Type: TC
Location: 55340 - 56527 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium_G
Species
Clostridium_G cochlearium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.