Cluster: MGYG000003139_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003139
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003139_2 | MGYG000003139_2_170 | 193718 | 194329 | - | CBM50 |
| STP | MGYG000003139_2 | MGYG000003139_2_171 | 194572 | 195501 | + | PfkB |
| pfam | MGYG000003139_2 | MGYG000003139_2_172 | 195504 | 195899 | + | RbsD_FucU |
| TC | MGYG000003139_2 | MGYG000003139_2_173 | 195899 | 197416 | + | 3.A.1.2.13 |
| TC | MGYG000003139_2 | MGYG000003139_2_174 | 197444 | 198379 | + | 3.A.1.2.1 |
| TC | MGYG000003139_2 | MGYG000003139_2_175 | 198422 | 199342 | + | 3.A.1.2.13 |
Gene ID: MGYG000003139_2_170
Type: CAZyme
Location: 193718 - 194329 (-)
Type: CAZyme
Location: 193718 - 194329 (-)
Gene ID: MGYG000003139_2_171
Type: STP
Location: 194572 - 195501 (+)
Type: STP
Location: 194572 - 195501 (+)
Gene ID: MGYG000003139_2_172
Type: pfam
Location: 195504 - 195899 (+)
Type: pfam
Location: 195504 - 195899 (+)
Gene ID: MGYG000003139_2_173
Type: TC
Location: 195899 - 197416 (+)
Type: TC
Location: 195899 - 197416 (+)
Gene ID: MGYG000003139_2_174
Type: TC
Location: 197444 - 198379 (+)
Type: TC
Location: 197444 - 198379 (+)
Gene ID: MGYG000003139_2_175
Type: TC
Location: 198422 - 199342 (+)
Type: TC
Location: 198422 - 199342 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium_G
Species
Clostridium_G cochlearium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.