Cluster: MGYG000003139_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003139
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003139_2 | MGYG000003139_2_68 | 73726 | 75600 | + | 3.A.16.1.2 |
| pfam | MGYG000003139_2 | MGYG000003139_2_69 | 75638 | 77770 | + | UvrD-helicase | AAA_19 |
| pfam | MGYG000003139_2 | MGYG000003139_2_70 | 77792 | 78880 | - | NPHP3_N |
| TC | MGYG000003139_2 | MGYG000003139_2_71 | 78932 | 80116 | - | 2.A.4.7.6 |
| peptidase | MGYG000003139_2 | MGYG000003139_2_72 | 80225 | 81517 | + | M18.UPW |
| pfam | MGYG000003139_2 | MGYG000003139_2_73 | 81830 | 83128 | + | Orn_DAP_Arg_deC | Orn_Arg_deC_N |
| CAZyme | MGYG000003139_2 | MGYG000003139_2_74 | 83253 | 91730 | + | GH94 | GT84 |
Gene ID: MGYG000003139_2_68
Type: TC
Location: 73726 - 75600 (+)
Type: TC
Location: 73726 - 75600 (+)
Gene ID: MGYG000003139_2_69
Type: pfam
Location: 75638 - 77770 (+)
Type: pfam
Location: 75638 - 77770 (+)
Gene ID: MGYG000003139_2_70
Type: pfam
Location: 77792 - 78880 (-)
Type: pfam
Location: 77792 - 78880 (-)
Gene ID: MGYG000003139_2_71
Type: TC
Location: 78932 - 80116 (-)
Type: TC
Location: 78932 - 80116 (-)
Gene ID: MGYG000003139_2_72
Type: peptidase
Location: 80225 - 81517 (+)
Type: peptidase
Location: 80225 - 81517 (+)
Gene ID: MGYG000003139_2_73
Type: pfam
Location: 81830 - 83128 (+)
Type: pfam
Location: 81830 - 83128 (+)
Gene ID: MGYG000003139_2_74
Type: CAZyme
Location: 83253 - 91730 (+)
Type: CAZyme
Location: 83253 - 91730 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium_G
Species
Clostridium_G cochlearium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.