Cluster: MGYG000003139_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003139
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003139_26 | MGYG000003139_26_4 | 2772 | 4049 | + | GH18 |
| TC | MGYG000003139_26 | MGYG000003139_26_5 | 4178 | 5401 | - | 9.B.102.1.15 |
| STP | MGYG000003139_26 | MGYG000003139_26_6 | 5487 | 7187 | - | Pyr_redox_2 | Rhodanese |
| TF | MGYG000003139_26 | MGYG000003139_26_7 | 7773 | 8663 | + | HTH_1 |
| TC | MGYG000003139_26 | MGYG000003139_26_8 | 8693 | 9220 | - | 9.B.102.2.4 |
| pfam | MGYG000003139_26 | MGYG000003139_26_9 | 9235 | 9462 | - | TusA |
| TC | MGYG000003139_26 | MGYG000003139_26_10 | 9484 | 10167 | - | 9.B.102.1.4 |
Gene ID: MGYG000003139_26_4
Type: CAZyme
Location: 2772 - 4049 (+)
Type: CAZyme
Location: 2772 - 4049 (+)
Gene ID: MGYG000003139_26_5
Type: TC
Location: 4178 - 5401 (-)
Type: TC
Location: 4178 - 5401 (-)
Gene ID: MGYG000003139_26_6
Type: STP
Location: 5487 - 7187 (-)
Type: STP
Location: 5487 - 7187 (-)
Gene ID: MGYG000003139_26_7
Type: TF
Location: 7773 - 8663 (+)
Type: TF
Location: 7773 - 8663 (+)
Gene ID: MGYG000003139_26_8
Type: TC
Location: 8693 - 9220 (-)
Type: TC
Location: 8693 - 9220 (-)
Gene ID: MGYG000003139_26_9
Type: pfam
Location: 9235 - 9462 (-)
Type: pfam
Location: 9235 - 9462 (-)
Gene ID: MGYG000003139_26_10
Type: TC
Location: 9484 - 10167 (-)
Type: TC
Location: 9484 - 10167 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium_G
Species
Clostridium_G cochlearium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.