Cluster: MGYG000003139_CGC10
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003139
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003139_11 | MGYG000003139_11_32 | 30900 | 32132 | + | GH3 |
| NULL(UNKNOWN) | MGYG000003139_11 | MGYG000003139_11_33 | 32197 | 32409 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000003139_11 | MGYG000003139_11_34 | 32599 | 33294 | + | DUF1275 |
| TC | MGYG000003139_11 | MGYG000003139_11_35 | 33422 | 34612 | - | 2.A.36.2.1 |
| STP | MGYG000003139_11 | MGYG000003139_11_36 | 34783 | 35997 | - | Fer4 | Fer4 |
| NULL(UNKNOWN) | MGYG000003139_11 | MGYG000003139_11_37 | 35994 | 36485 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003139_11 | MGYG000003139_11_38 | 36501 | 37481 | - | 3.D.1.5.1 |
| pfam | MGYG000003139_11 | MGYG000003139_11_39 | 37597 | 38229 | - | 2Fe-2S_thioredx |
| TC | MGYG000003139_11 | MGYG000003139_11_40 | 38262 | 38741 | - | 3.D.1.1.1 |
| STP | MGYG000003139_11 | MGYG000003139_11_41 | 39088 | 39681 | + | TetR_N |
| TC | MGYG000003139_11 | MGYG000003139_11_42 | 39756 | 40391 | - | 2.A.76.1.8 |
| NULL(UNKNOWN) | MGYG000003139_11 | MGYG000003139_11_43 | 40524 | 40829 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003139_11 | MGYG000003139_11_44 | 41023 | 42318 | + | 2.A.26.1.5 |
Gene ID: MGYG000003139_11_32
Type: CAZyme
Location: 30900 - 32132 (+)
Type: CAZyme
Location: 30900 - 32132 (+)
Gene ID: MGYG000003139_11_33
Type:
Location: 32197 - 32409 (+)
Type:
Location: 32197 - 32409 (+)
Gene ID: MGYG000003139_11_34
Type: pfam
Location: 32599 - 33294 (+)
Type: pfam
Location: 32599 - 33294 (+)
Gene ID: MGYG000003139_11_35
Type: TC
Location: 33422 - 34612 (-)
Type: TC
Location: 33422 - 34612 (-)
Gene ID: MGYG000003139_11_36
Type: STP
Location: 34783 - 35997 (-)
Type: STP
Location: 34783 - 35997 (-)
Gene ID: MGYG000003139_11_37
Type:
Location: 35994 - 36485 (-)
Type:
Location: 35994 - 36485 (-)
Gene ID: MGYG000003139_11_38
Type: TC
Location: 36501 - 37481 (-)
Type: TC
Location: 36501 - 37481 (-)
Gene ID: MGYG000003139_11_39
Type: pfam
Location: 37597 - 38229 (-)
Type: pfam
Location: 37597 - 38229 (-)
Gene ID: MGYG000003139_11_40
Type: TC
Location: 38262 - 38741 (-)
Type: TC
Location: 38262 - 38741 (-)
Gene ID: MGYG000003139_11_41
Type: STP
Location: 39088 - 39681 (+)
Type: STP
Location: 39088 - 39681 (+)
Gene ID: MGYG000003139_11_42
Type: TC
Location: 39756 - 40391 (-)
Type: TC
Location: 39756 - 40391 (-)
Gene ID: MGYG000003139_11_43
Type:
Location: 40524 - 40829 (-)
Type:
Location: 40524 - 40829 (-)
Gene ID: MGYG000003139_11_44
Type: TC
Location: 41023 - 42318 (+)
Type: TC
Location: 41023 - 42318 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium_G
Species
Clostridium_G cochlearium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.