Cluster: MGYG000003138_CGC6
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 11
- Substrate:
- Genome ID: MGYG000003138
- CGC Family ID: CGCFAM_00463
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003138_5 | MGYG000003138_5_73 | 76327 | 77838 | - | GT4 |
| TC | MGYG000003138_5 | MGYG000003138_5_74 | 77850 | 80222 | - | 3.A.5.10.1 |
| pfam | MGYG000003138_5 | MGYG000003138_5_75 | 80215 | 80655 | - | Sec-ASP3 |
| TC | MGYG000003138_5 | MGYG000003138_5_76 | 80652 | 82187 | - | 3.A.5.10.1 |
| TC | MGYG000003138_5 | MGYG000003138_5_77 | 82171 | 83751 | - | 3.A.5.10.1 |
| TC | MGYG000003138_5 | MGYG000003138_5_78 | 83761 | 84978 | - | 3.A.5.10.1 |
| CAZyme | MGYG000003138_5 | MGYG000003138_5_79 | 85341 | 87107 | - | GT2 | GT2 |
| CAZyme | MGYG000003138_5 | MGYG000003138_5_80 | 87157 | 88056 | - | GT2 |
| CAZyme | MGYG000003138_5 | MGYG000003138_5_81 | 88075 | 88959 | - | GT2 |
| CAZyme | MGYG000003138_5 | MGYG000003138_5_82 | 88963 | 89871 | - | GT2 |
| CAZyme | MGYG000003138_5 | MGYG000003138_5_83 | 89886 | 91949 | - | GT101 | GT8 |
| CAZyme | MGYG000003138_5 | MGYG000003138_5_84 | 91977 | 94214 | - | GT101 | GT113 |
| CAZyme | MGYG000003138_5 | MGYG000003138_5_85 | 94314 | 95192 | - | GT2 |
| CAZyme | MGYG000003138_5 | MGYG000003138_5_86 | 95179 | 96084 | - | GT2 |
| CAZyme | MGYG000003138_5 | MGYG000003138_5_87 | 96090 | 97298 | - | GT8 |
| pfam | MGYG000003138_5 | MGYG000003138_5_88 | 97308 | 98186 | - | Hexapep | Hexapep_2 |
| CAZyme | MGYG000003138_5 | MGYG000003138_5_89 | 98183 | 100267 | - | GT2 | GT8 |
Gene ID: MGYG000003138_5_73
Type: CAZyme
Location: 76327 - 77838 (-)
Type: CAZyme
Location: 76327 - 77838 (-)
Gene ID: MGYG000003138_5_74
Type: TC
Location: 77850 - 80222 (-)
Type: TC
Location: 77850 - 80222 (-)
Gene ID: MGYG000003138_5_75
Type: pfam
Location: 80215 - 80655 (-)
Type: pfam
Location: 80215 - 80655 (-)
Gene ID: MGYG000003138_5_76
Type: TC
Location: 80652 - 82187 (-)
Type: TC
Location: 80652 - 82187 (-)
Gene ID: MGYG000003138_5_77
Type: TC
Location: 82171 - 83751 (-)
Type: TC
Location: 82171 - 83751 (-)
Gene ID: MGYG000003138_5_78
Type: TC
Location: 83761 - 84978 (-)
Type: TC
Location: 83761 - 84978 (-)
Gene ID: MGYG000003138_5_79
Type: CAZyme
Location: 85341 - 87107 (-)
Type: CAZyme
Location: 85341 - 87107 (-)
Gene ID: MGYG000003138_5_80
Type: CAZyme
Location: 87157 - 88056 (-)
Type: CAZyme
Location: 87157 - 88056 (-)
Gene ID: MGYG000003138_5_81
Type: CAZyme
Location: 88075 - 88959 (-)
Type: CAZyme
Location: 88075 - 88959 (-)
Gene ID: MGYG000003138_5_82
Type: CAZyme
Location: 88963 - 89871 (-)
Type: CAZyme
Location: 88963 - 89871 (-)
Gene ID: MGYG000003138_5_83
Type: CAZyme
Location: 89886 - 91949 (-)
Type: CAZyme
Location: 89886 - 91949 (-)
Gene ID: MGYG000003138_5_84
Type: CAZyme
Location: 91977 - 94214 (-)
Type: CAZyme
Location: 91977 - 94214 (-)
Gene ID: MGYG000003138_5_85
Type: CAZyme
Location: 94314 - 95192 (-)
Type: CAZyme
Location: 94314 - 95192 (-)
Gene ID: MGYG000003138_5_86
Type: CAZyme
Location: 95179 - 96084 (-)
Type: CAZyme
Location: 95179 - 96084 (-)
Gene ID: MGYG000003138_5_87
Type: CAZyme
Location: 96090 - 97298 (-)
Type: CAZyme
Location: 96090 - 97298 (-)
Gene ID: MGYG000003138_5_88
Type: pfam
Location: 97308 - 98186 (-)
Type: pfam
Location: 97308 - 98186 (-)
Gene ID: MGYG000003138_5_89
Type: CAZyme
Location: 98183 - 100267 (-)
Type: CAZyme
Location: 98183 - 100267 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus mitis_BX
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.