Cluster: MGYG000003138_CGC2
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003138
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003138_1 | MGYG000003138_1_167 | 167603 | 168526 | - | 3.A.1.1.29 |
| TC | MGYG000003138_1 | MGYG000003138_1_168 | 168540 | 169469 | - | 3.A.1.1.10 |
| CAZyme | MGYG000003138_1 | MGYG000003138_1_169 | 169679 | 171559 | - | GH20 |
| pfam | MGYG000003138_1 | MGYG000003138_1_170 | 171553 | 172434 | - | ROK |
| CAZyme | MGYG000003138_1 | MGYG000003138_1_171 | 172506 | 175151 | - | GH38 |
| CAZyme | MGYG000003138_1 | MGYG000003138_1_172 | 175250 | 176530 | - | GH125 |
| CAZyme | MGYG000003138_1 | MGYG000003138_1_173 | 176701 | 178788 | + | GH92 |
| peptidase | MGYG000003138_1 | MGYG000003138_1_174 | 179062 | 179961 | - | I87.UPW |
| TC | MGYG000003138_1 | MGYG000003138_1_175 | 180711 | 182216 | - | 3.A.1.15.3 |
| TC | MGYG000003138_1 | MGYG000003138_1_176 | 182226 | 183032 | - | 3.A.1.15.3 |
| TC | MGYG000003138_1 | MGYG000003138_1_177 | 183025 | 183729 | - | 3.A.1.15.3 |
Gene ID: MGYG000003138_1_167
Type: TC
Location: 167603 - 168526 (-)
Type: TC
Location: 167603 - 168526 (-)
Gene ID: MGYG000003138_1_168
Type: TC
Location: 168540 - 169469 (-)
Type: TC
Location: 168540 - 169469 (-)
Gene ID: MGYG000003138_1_169
Type: CAZyme
Location: 169679 - 171559 (-)
Type: CAZyme
Location: 169679 - 171559 (-)
Gene ID: MGYG000003138_1_170
Type: pfam
Location: 171553 - 172434 (-)
Type: pfam
Location: 171553 - 172434 (-)
Gene ID: MGYG000003138_1_171
Type: CAZyme
Location: 172506 - 175151 (-)
Type: CAZyme
Location: 172506 - 175151 (-)
Gene ID: MGYG000003138_1_172
Type: CAZyme
Location: 175250 - 176530 (-)
Type: CAZyme
Location: 175250 - 176530 (-)
Gene ID: MGYG000003138_1_173
Type: CAZyme
Location: 176701 - 178788 (+)
Type: CAZyme
Location: 176701 - 178788 (+)
Gene ID: MGYG000003138_1_174
Type: peptidase
Location: 179062 - 179961 (-)
Type: peptidase
Location: 179062 - 179961 (-)
Gene ID: MGYG000003138_1_175
Type: TC
Location: 180711 - 182216 (-)
Type: TC
Location: 180711 - 182216 (-)
Gene ID: MGYG000003138_1_176
Type: TC
Location: 182226 - 183032 (-)
Type: TC
Location: 182226 - 183032 (-)
Gene ID: MGYG000003138_1_177
Type: TC
Location: 183025 - 183729 (-)
Type: TC
Location: 183025 - 183729 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus mitis_BX
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.