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Cluster: MGYG000003138_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003138_12 MGYG000003138_12_36 38266 42465 - GH20 | GH20
TF MGYG000003138_12 MGYG000003138_12_37 42780 43496 - GntR
CAZyme MGYG000003138_12 MGYG000003138_12_38 43816 45603 + GH35
TC MGYG000003138_12 MGYG000003138_12_39 45600 46076 + 4.A.6.1.18
TC MGYG000003138_12 MGYG000003138_12_40 46103 47008 + 4.A.6.1.18
TC MGYG000003138_12 MGYG000003138_12_41 46995 47816 + 4.A.6.1.18
TC MGYG000003138_12 MGYG000003138_12_42 47820 48224 + 4.A.6.1.18
Gene ID: MGYG000003138_12_36
Type: CAZyme
Location: 38266 - 42465 (-)
Gene ID: MGYG000003138_12_37
Type: TF
Location: 42780 - 43496 (-)
Gene ID: MGYG000003138_12_38
Type: CAZyme
Location: 43816 - 45603 (+)
Gene ID: MGYG000003138_12_39
Type: TC
Location: 45600 - 46076 (+)
Gene ID: MGYG000003138_12_40
Type: TC
Location: 46103 - 47008 (+)
Gene ID: MGYG000003138_12_41
Type: TC
Location: 46995 - 47816 (+)
Gene ID: MGYG000003138_12_42
Type: TC
Location: 47820 - 48224 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003138_12_41 vegan > omnivore 2.07527 0.03330

🧭 Explore Read Mapping of CGC

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