Cluster: MGYG000003138_CGC11
🧬 Cluster Details
- Gene Count: 24
- CAZyme Count: 8
- Substrate:
- Genome ID: MGYG000003138
- CGC Family ID: CGCFAM_00402
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003138_9 | MGYG000003138_9_18 | 17117 | 19300 | + | GT51 |
| CAZyme | MGYG000003138_9 | MGYG000003138_9_19 | 19468 | 27804 | - | GH20 | GH84 |
| CAZyme | MGYG000003138_9 | MGYG000003138_9_20 | 27947 | 34459 | - | GH101 |
| TC | MGYG000003138_9 | MGYG000003138_9_21 | 34756 | 36735 | - | 3.A.1.5.19 |
| CAZyme | MGYG000003138_9 | MGYG000003138_9_22 | 36934 | 37986 | - | GT113 |
| STP | MGYG000003138_9 | MGYG000003138_9_23 | 38011 | 39108 | - | Pyr_redox |
| TC | MGYG000003138_9 | MGYG000003138_9_24 | 39122 | 40120 | - | 9.B.97.1.1 |
| TC | MGYG000003138_9 | MGYG000003138_9_25 | 40122 | 41537 | - | 2.A.66.2.16 |
| NULL(UNKNOWN) | MGYG000003138_9 | MGYG000003138_9_26 | 41689 | 42834 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003138_9 | MGYG000003138_9_27 | 42858 | 43823 | - | GT2 |
| pfam | MGYG000003138_9 | MGYG000003138_9_28 | 43823 | 44917 | - | Epimerase_2 |
| CAZyme | MGYG000003138_9 | MGYG000003138_9_29 | 44914 | 45999 | - | GT4 |
| CAZyme | MGYG000003138_9 | MGYG000003138_9_30 | 45974 | 46696 | - | GT26 |
| pfam | MGYG000003138_9 | MGYG000003138_9_31 | 46716 | 47501 | - | LicD |
| TC | MGYG000003138_9 | MGYG000003138_9_32 | 47506 | 48873 | - | 9.B.18.1.2 |
| TC | MGYG000003138_9 | MGYG000003138_9_33 | 48908 | 49591 | - | 8.A.3.2.2 |
| TC | MGYG000003138_9 | MGYG000003138_9_34 | 49601 | 50293 | - | 8.A.3.2.3 |
| pfam | MGYG000003138_9 | MGYG000003138_9_35 | 50302 | 51033 | - | CpsB_CapC |
| pfam | MGYG000003138_9 | MGYG000003138_9_36 | 51035 | 52480 | - | DNA_PPF | LytR_cpsA_psr |
| TC | MGYG000003138_9 | MGYG000003138_9_37 | 52720 | 54678 | - | 3.A.1.5.19 |
| CAZyme | MGYG000003138_9 | MGYG000003138_9_38 | 54875 | 56482 | - | GH13_31 |
| pfam | MGYG000003138_9 | MGYG000003138_9_39 | 56635 | 58119 | + | DUF1846 | DUF1846_C |
| pfam | MGYG000003138_9 | MGYG000003138_9_40 | 58214 | 58696 | + | LuxS |
| TC | MGYG000003138_9 | MGYG000003138_9_41 | 58757 | 60862 | - | 3.A.9.1.2 |
Gene ID: MGYG000003138_9_18
Type: CAZyme
Location: 17117 - 19300 (+)
Type: CAZyme
Location: 17117 - 19300 (+)
Gene ID: MGYG000003138_9_19
Type: CAZyme
Location: 19468 - 27804 (-)
Type: CAZyme
Location: 19468 - 27804 (-)
Gene ID: MGYG000003138_9_20
Type: CAZyme
Location: 27947 - 34459 (-)
Type: CAZyme
Location: 27947 - 34459 (-)
Gene ID: MGYG000003138_9_21
Type: TC
Location: 34756 - 36735 (-)
Type: TC
Location: 34756 - 36735 (-)
Gene ID: MGYG000003138_9_22
Type: CAZyme
Location: 36934 - 37986 (-)
Type: CAZyme
Location: 36934 - 37986 (-)
Gene ID: MGYG000003138_9_23
Type: STP
Location: 38011 - 39108 (-)
Type: STP
Location: 38011 - 39108 (-)
Gene ID: MGYG000003138_9_24
Type: TC
Location: 39122 - 40120 (-)
Type: TC
Location: 39122 - 40120 (-)
Gene ID: MGYG000003138_9_25
Type: TC
Location: 40122 - 41537 (-)
Type: TC
Location: 40122 - 41537 (-)
Gene ID: MGYG000003138_9_26
Type:
Location: 41689 - 42834 (-)
Type:
Location: 41689 - 42834 (-)
Gene ID: MGYG000003138_9_27
Type: CAZyme
Location: 42858 - 43823 (-)
Type: CAZyme
Location: 42858 - 43823 (-)
Gene ID: MGYG000003138_9_28
Type: pfam
Location: 43823 - 44917 (-)
Type: pfam
Location: 43823 - 44917 (-)
Gene ID: MGYG000003138_9_29
Type: CAZyme
Location: 44914 - 45999 (-)
Type: CAZyme
Location: 44914 - 45999 (-)
Gene ID: MGYG000003138_9_30
Type: CAZyme
Location: 45974 - 46696 (-)
Type: CAZyme
Location: 45974 - 46696 (-)
Gene ID: MGYG000003138_9_31
Type: pfam
Location: 46716 - 47501 (-)
Type: pfam
Location: 46716 - 47501 (-)
Gene ID: MGYG000003138_9_32
Type: TC
Location: 47506 - 48873 (-)
Type: TC
Location: 47506 - 48873 (-)
Gene ID: MGYG000003138_9_33
Type: TC
Location: 48908 - 49591 (-)
Type: TC
Location: 48908 - 49591 (-)
Gene ID: MGYG000003138_9_34
Type: TC
Location: 49601 - 50293 (-)
Type: TC
Location: 49601 - 50293 (-)
Gene ID: MGYG000003138_9_35
Type: pfam
Location: 50302 - 51033 (-)
Type: pfam
Location: 50302 - 51033 (-)
Gene ID: MGYG000003138_9_36
Type: pfam
Location: 51035 - 52480 (-)
Type: pfam
Location: 51035 - 52480 (-)
Gene ID: MGYG000003138_9_37
Type: TC
Location: 52720 - 54678 (-)
Type: TC
Location: 52720 - 54678 (-)
Gene ID: MGYG000003138_9_38
Type: CAZyme
Location: 54875 - 56482 (-)
Type: CAZyme
Location: 54875 - 56482 (-)
Gene ID: MGYG000003138_9_39
Type: pfam
Location: 56635 - 58119 (+)
Type: pfam
Location: 56635 - 58119 (+)
Gene ID: MGYG000003138_9_40
Type: pfam
Location: 58214 - 58696 (+)
Type: pfam
Location: 58214 - 58696 (+)
Gene ID: MGYG000003138_9_41
Type: TC
Location: 58757 - 60862 (-)
Type: TC
Location: 58757 - 60862 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus mitis_BX
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.