Cluster: MGYG000003137_CGC46
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003137
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003137_46 | MGYG000003137_46_28 | 26795 | 29101 | + | GH15 |
| STP | MGYG000003137_46 | MGYG000003137_46_29 | 29193 | 30455 | + | TPR_1 | TPR_1 | TPR_1 | TPR_1 |
| NULL(UNKNOWN) | MGYG000003137_46 | MGYG000003137_46_30 | 30619 | 31383 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003137_46 | MGYG000003137_46_31 | 31591 | 33111 | + | GT5 |
| pfam | MGYG000003137_46 | MGYG000003137_46_32 | 33226 | 33726 | + | Cu-oxidase_3 |
| NULL(UNKNOWN) | MGYG000003137_46 | MGYG000003137_46_33 | 33732 | 33893 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003137_46 | MGYG000003137_46_34 | 34020 | 36086 | + | AA1 |
| TC | MGYG000003137_46 | MGYG000003137_46_35 | 36096 | 36881 | + | 1.B.76.1.1 |
Gene ID: MGYG000003137_46_28
Type: CAZyme
Location: 26795 - 29101 (+)
Type: CAZyme
Location: 26795 - 29101 (+)
Gene ID: MGYG000003137_46_29
Type: STP
Location: 29193 - 30455 (+)
Type: STP
Location: 29193 - 30455 (+)
Gene ID: MGYG000003137_46_30
Type:
Location: 30619 - 31383 (-)
Type:
Location: 30619 - 31383 (-)
Gene ID: MGYG000003137_46_31
Type: CAZyme
Location: 31591 - 33111 (+)
Type: CAZyme
Location: 31591 - 33111 (+)
Gene ID: MGYG000003137_46_32
Type: pfam
Location: 33226 - 33726 (+)
Type: pfam
Location: 33226 - 33726 (+)
Gene ID: MGYG000003137_46_33
Type:
Location: 33732 - 33893 (+)
Type:
Location: 33732 - 33893 (+)
Gene ID: MGYG000003137_46_34
Type: CAZyme
Location: 34020 - 36086 (+)
Type: CAZyme
Location: 34020 - 36086 (+)
Gene ID: MGYG000003137_46_35
Type: TC
Location: 36096 - 36881 (+)
Type: TC
Location: 36096 - 36881 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhizobiales
Family
Xanthobacteraceae
Genus
Bradyrhizobium
Species
Bradyrhizobium denitrificans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.