Cluster: MGYG000003137_CGC38
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003137
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003137_30 | MGYG000003137_30_20 | 19568 | 21202 | + | AA3_2 |
| TC | MGYG000003137_30 | MGYG000003137_30_21 | 21286 | 22431 | - | 3.A.1.4.11 |
| TF | MGYG000003137_30 | MGYG000003137_30_22 | 22609 | 23397 | + | GerE |
| pfam | MGYG000003137_30 | MGYG000003137_30_23 | 23484 | 24662 | + | p450 |
| TC | MGYG000003137_30 | MGYG000003137_30_24 | 24708 | 26387 | - | 1.B.52.2.1 |
| TF | MGYG000003137_30 | MGYG000003137_30_25 | 26711 | 27826 | + | HTH_AraC |
| TC | MGYG000003137_30 | MGYG000003137_30_26 | 28675 | 30267 | - | 2.A.21.9.1 |
Gene ID: MGYG000003137_30_20
Type: CAZyme
Location: 19568 - 21202 (+)
Type: CAZyme
Location: 19568 - 21202 (+)
Gene ID: MGYG000003137_30_21
Type: TC
Location: 21286 - 22431 (-)
Type: TC
Location: 21286 - 22431 (-)
Gene ID: MGYG000003137_30_22
Type: TF
Location: 22609 - 23397 (+)
Type: TF
Location: 22609 - 23397 (+)
Gene ID: MGYG000003137_30_23
Type: pfam
Location: 23484 - 24662 (+)
Type: pfam
Location: 23484 - 24662 (+)
Gene ID: MGYG000003137_30_24
Type: TC
Location: 24708 - 26387 (-)
Type: TC
Location: 24708 - 26387 (-)
Gene ID: MGYG000003137_30_25
Type: TF
Location: 26711 - 27826 (+)
Type: TF
Location: 26711 - 27826 (+)
Gene ID: MGYG000003137_30_26
Type: TC
Location: 28675 - 30267 (-)
Type: TC
Location: 28675 - 30267 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhizobiales
Family
Xanthobacteraceae
Genus
Bradyrhizobium
Species
Bradyrhizobium denitrificans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.