Cluster: MGYG000003137_CGC2
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000003137
- CGC Family ID: CGCFAM_00006
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003137_1 | MGYG000003137_1_386 | 449484 | 450851 | - | 2.A.66.2.23 |
| pfam | MGYG000003137_1 | MGYG000003137_1_387 | 451125 | 452228 | + | Glyco_trans_1_2 |
| NULL(UNKNOWN) | MGYG000003137_1 | MGYG000003137_1_388 | 452228 | 453223 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003137_1 | MGYG000003137_1_389 | 453213 | 454136 | - | GT14 |
| pfam | MGYG000003137_1 | MGYG000003137_1_390 | 454167 | 455234 | - | Glyco_transf_61 |
| CAZyme | MGYG000003137_1 | MGYG000003137_1_391 | 455315 | 456523 | - | GT4 |
| CAZyme | MGYG000003137_1 | MGYG000003137_1_392 | 456656 | 457882 | - | GT4 |
| CAZyme | MGYG000003137_1 | MGYG000003137_1_393 | 457884 | 458870 | - | GT2 |
| pfam | MGYG000003137_1 | MGYG000003137_1_394 | 458863 | 459384 | - | Hexapep | Hexapep_2 | Hexapep_2 | Hexapep_2 |
| CAZyme | MGYG000003137_1 | MGYG000003137_1_395 | 459406 | 460416 | - | GT2 |
| pfam | MGYG000003137_1 | MGYG000003137_1_396 | 460413 | 460931 | - | Hexapep |
| CAZyme | MGYG000003137_1 | MGYG000003137_1_397 | 461199 | 462386 | + | GT2 |
| CAZyme | MGYG000003137_1 | MGYG000003137_1_398 | 462540 | 463772 | + | GT26 |
Gene ID: MGYG000003137_1_386
Type: TC
Location: 449484 - 450851 (-)
Type: TC
Location: 449484 - 450851 (-)
Gene ID: MGYG000003137_1_387
Type: pfam
Location: 451125 - 452228 (+)
Type: pfam
Location: 451125 - 452228 (+)
Gene ID: MGYG000003137_1_388
Type:
Location: 452228 - 453223 (+)
Type:
Location: 452228 - 453223 (+)
Gene ID: MGYG000003137_1_389
Type: CAZyme
Location: 453213 - 454136 (-)
Type: CAZyme
Location: 453213 - 454136 (-)
Gene ID: MGYG000003137_1_390
Type: pfam
Location: 454167 - 455234 (-)
Type: pfam
Location: 454167 - 455234 (-)
Gene ID: MGYG000003137_1_391
Type: CAZyme
Location: 455315 - 456523 (-)
Type: CAZyme
Location: 455315 - 456523 (-)
Gene ID: MGYG000003137_1_392
Type: CAZyme
Location: 456656 - 457882 (-)
Type: CAZyme
Location: 456656 - 457882 (-)
Gene ID: MGYG000003137_1_393
Type: CAZyme
Location: 457884 - 458870 (-)
Type: CAZyme
Location: 457884 - 458870 (-)
Gene ID: MGYG000003137_1_394
Type: pfam
Location: 458863 - 459384 (-)
Type: pfam
Location: 458863 - 459384 (-)
Gene ID: MGYG000003137_1_395
Type: CAZyme
Location: 459406 - 460416 (-)
Type: CAZyme
Location: 459406 - 460416 (-)
Gene ID: MGYG000003137_1_396
Type: pfam
Location: 460413 - 460931 (-)
Type: pfam
Location: 460413 - 460931 (-)
Gene ID: MGYG000003137_1_397
Type: CAZyme
Location: 461199 - 462386 (+)
Type: CAZyme
Location: 461199 - 462386 (+)
Gene ID: MGYG000003137_1_398
Type: CAZyme
Location: 462540 - 463772 (+)
Type: CAZyme
Location: 462540 - 463772 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhizobiales
Family
Xanthobacteraceae
Genus
Bradyrhizobium
Species
Bradyrhizobium denitrificans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.