Cluster: MGYG000003137_CGC18
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003137
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003137_11 | MGYG000003137_11_188 | 190315 | 191652 | + | 2.A.23.1.9 |
| pfam | MGYG000003137_11 | MGYG000003137_11_189 | 191763 | 194972 | - | RNase_E_G | RNase_E_G_Thio |
| pfam | MGYG000003137_11 | MGYG000003137_11_190 | 195779 | 197089 | + | Amidase_3 | AMIN |
| CAZyme | MGYG000003137_11 | MGYG000003137_11_191 | 197320 | 199827 | + | GT51 |
| pfam | MGYG000003137_11 | MGYG000003137_11_192 | 200121 | 201092 | + | RF-1 | PCRF |
| pfam | MGYG000003137_11 | MGYG000003137_11_193 | 201096 | 201977 | + | NAD_binding_2 | F420_oxidored | NAD_binding_11 |
| TC | MGYG000003137_11 | MGYG000003137_11_194 | 202064 | 202987 | + | 2.A.7.3.22 |
| STP | MGYG000003137_11 | MGYG000003137_11_195 | 203003 | 203638 | - | Pribosyltran |
| TC | MGYG000003137_11 | MGYG000003137_11_196 | 203692 | 205419 | - | 2.A.37.1.8 |
| NULL(UNKNOWN) | MGYG000003137_11 | MGYG000003137_11_197 | 205827 | 206231 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000003137_11 | MGYG000003137_11_198 | 206687 | 206851 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003137_11 | MGYG000003137_11_199 | 207018 | 207629 | - | 2.A.76.1.1 |
Gene ID: MGYG000003137_11_188
Type: TC
Location: 190315 - 191652 (+)
Type: TC
Location: 190315 - 191652 (+)
Gene ID: MGYG000003137_11_189
Type: pfam
Location: 191763 - 194972 (-)
Type: pfam
Location: 191763 - 194972 (-)
Gene ID: MGYG000003137_11_190
Type: pfam
Location: 195779 - 197089 (+)
Type: pfam
Location: 195779 - 197089 (+)
Gene ID: MGYG000003137_11_191
Type: CAZyme
Location: 197320 - 199827 (+)
Type: CAZyme
Location: 197320 - 199827 (+)
Gene ID: MGYG000003137_11_192
Type: pfam
Location: 200121 - 201092 (+)
Type: pfam
Location: 200121 - 201092 (+)
Gene ID: MGYG000003137_11_193
Type: pfam
Location: 201096 - 201977 (+)
Type: pfam
Location: 201096 - 201977 (+)
Gene ID: MGYG000003137_11_194
Type: TC
Location: 202064 - 202987 (+)
Type: TC
Location: 202064 - 202987 (+)
Gene ID: MGYG000003137_11_195
Type: STP
Location: 203003 - 203638 (-)
Type: STP
Location: 203003 - 203638 (-)
Gene ID: MGYG000003137_11_196
Type: TC
Location: 203692 - 205419 (-)
Type: TC
Location: 203692 - 205419 (-)
Gene ID: MGYG000003137_11_197
Type:
Location: 205827 - 206231 (-)
Type:
Location: 205827 - 206231 (-)
Gene ID: MGYG000003137_11_198
Type:
Location: 206687 - 206851 (-)
Type:
Location: 206687 - 206851 (-)
Gene ID: MGYG000003137_11_199
Type: TC
Location: 207018 - 207629 (-)
Type: TC
Location: 207018 - 207629 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhizobiales
Family
Xanthobacteraceae
Genus
Bradyrhizobium
Species
Bradyrhizobium denitrificans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.