Cluster: MGYG000003122_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003122
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003122_5 | MGYG000003122_5_47 | 46944 | 48302 | - | 2.A.33.1.1 |
| pfam | MGYG000003122_5 | MGYG000003122_5_48 | 48571 | 49494 | - | DHH | DHHA2 |
| STP | MGYG000003122_5 | MGYG000003122_5_49 | 49660 | 50613 | - | Glucokinase |
| TC | MGYG000003122_5 | MGYG000003122_5_50 | 50855 | 51187 | - | 4.A.3.2.3 |
| TC | MGYG000003122_5 | MGYG000003122_5_51 | 51197 | 51499 | - | 4.A.3.2.9 |
| TC | MGYG000003122_5 | MGYG000003122_5_52 | 51658 | 53001 | - | 4.A.3.2.9 |
| CAZyme | MGYG000003122_5 | MGYG000003122_5_53 | 53122 | 54522 | - | GH1 |
Gene ID: MGYG000003122_5_47
Type: TC
Location: 46944 - 48302 (-)
Type: TC
Location: 46944 - 48302 (-)
Gene ID: MGYG000003122_5_48
Type: pfam
Location: 48571 - 49494 (-)
Type: pfam
Location: 48571 - 49494 (-)
Gene ID: MGYG000003122_5_49
Type: STP
Location: 49660 - 50613 (-)
Type: STP
Location: 49660 - 50613 (-)
Gene ID: MGYG000003122_5_50
Type: TC
Location: 50855 - 51187 (-)
Type: TC
Location: 50855 - 51187 (-)
Gene ID: MGYG000003122_5_51
Type: TC
Location: 51197 - 51499 (-)
Type: TC
Location: 51197 - 51499 (-)
Gene ID: MGYG000003122_5_52
Type: TC
Location: 51658 - 53001 (-)
Type: TC
Location: 51658 - 53001 (-)
Gene ID: MGYG000003122_5_53
Type: CAZyme
Location: 53122 - 54522 (-)
Type: CAZyme
Location: 53122 - 54522 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900541235
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.