Cluster: MGYG000003121_CGC8
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000003121
- CGC Family ID: CGCFAM_04256
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003121_18 | MGYG000003121_18_8 | 6950 | 7648 | + | 8.A.3.2.3 |
| TC | MGYG000003121_18 | MGYG000003121_18_9 | 7660 | 8358 | + | 8.A.3.2.3 |
| TC | MGYG000003121_18 | MGYG000003121_18_10 | 8380 | 9042 | + | 9.B.18.1.2 |
| CAZyme | MGYG000003121_18 | MGYG000003121_18_11 | 9073 | 9957 | + | GT111 |
| pfam | MGYG000003121_18 | MGYG000003121_18_12 | 9968 | 10789 | + | LicD |
| CAZyme | MGYG000003121_18 | MGYG000003121_18_13 | 10795 | 11763 | + | GT32 |
| CAZyme | MGYG000003121_18 | MGYG000003121_18_14 | 11773 | 12882 | + | GT4 |
| CAZyme | MGYG000003121_18 | MGYG000003121_18_15 | 12872 | 13876 | + | GT2 |
| CAZyme | MGYG000003121_18 | MGYG000003121_18_16 | 13866 | 14834 | + | GT2 |
| pfam | MGYG000003121_18 | MGYG000003121_18_17 | 14973 | 16238 | + | EpsG |
| CAZyme | MGYG000003121_18 | MGYG000003121_18_18 | 16304 | 17254 | + | GT14 |
| CAZyme | MGYG000003121_18 | MGYG000003121_18_19 | 17257 | 18237 | + | GT2 |
Gene ID: MGYG000003121_18_8
Type: TC
Location: 6950 - 7648 (+)
Type: TC
Location: 6950 - 7648 (+)
Gene ID: MGYG000003121_18_9
Type: TC
Location: 7660 - 8358 (+)
Type: TC
Location: 7660 - 8358 (+)
Gene ID: MGYG000003121_18_10
Type: TC
Location: 8380 - 9042 (+)
Type: TC
Location: 8380 - 9042 (+)
Gene ID: MGYG000003121_18_11
Type: CAZyme
Location: 9073 - 9957 (+)
Type: CAZyme
Location: 9073 - 9957 (+)
Gene ID: MGYG000003121_18_12
Type: pfam
Location: 9968 - 10789 (+)
Type: pfam
Location: 9968 - 10789 (+)
Gene ID: MGYG000003121_18_13
Type: CAZyme
Location: 10795 - 11763 (+)
Type: CAZyme
Location: 10795 - 11763 (+)
Gene ID: MGYG000003121_18_14
Type: CAZyme
Location: 11773 - 12882 (+)
Type: CAZyme
Location: 11773 - 12882 (+)
Gene ID: MGYG000003121_18_15
Type: CAZyme
Location: 12872 - 13876 (+)
Type: CAZyme
Location: 12872 - 13876 (+)
Gene ID: MGYG000003121_18_16
Type: CAZyme
Location: 13866 - 14834 (+)
Type: CAZyme
Location: 13866 - 14834 (+)
Gene ID: MGYG000003121_18_17
Type: pfam
Location: 14973 - 16238 (+)
Type: pfam
Location: 14973 - 16238 (+)
Gene ID: MGYG000003121_18_18
Type: CAZyme
Location: 16304 - 17254 (+)
Type: CAZyme
Location: 16304 - 17254 (+)
Gene ID: MGYG000003121_18_19
Type: CAZyme
Location: 17257 - 18237 (+)
Type: CAZyme
Location: 17257 - 18237 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Staphylococcales
Family
Gemellaceae
Genus
Gemella
Species
Gemella sp002871655
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.