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Cluster: MGYG000003121_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003121_4 MGYG000003121_4_19 20960 21181 + 3.A.3.6.10
TC MGYG000003121_4 MGYG000003121_4_20 21197 23041 + 3.A.3.6.10
pfam MGYG000003121_4 MGYG000003121_4_21 23305 23664 + Fer2_BFD | zf_CopZ
TC MGYG000003121_4 MGYG000003121_4_22 24330 25151 + 3.A.1.25.6
TC MGYG000003121_4 MGYG000003121_4_23 25136 26023 + 3.A.1.26.7
TC MGYG000003121_4 MGYG000003121_4_24 26016 26801 + 3.A.1.25.4
pfam MGYG000003121_4 MGYG000003121_4_25 26827 27858 + Sua5_yciO_yrdC | Sua5_C
CAZyme MGYG000003121_4 MGYG000003121_4_26 27874 28836 + GT2
TC MGYG000003121_4 MGYG000003121_4_27 28843 30411 + 9.B.142.3.8
pfam MGYG000003121_4 MGYG000003121_4_28 30392 31591 + LRR_4 | LRR_4
pfam MGYG000003121_4 MGYG000003121_4_29 31931 33874 + tRNA-synt_2b | HGTP_anticodon | tRNA_SAD
TC MGYG000003121_4 MGYG000003121_4_30 33932 34516 + 3.D.1.8.1
TC MGYG000003121_4 MGYG000003121_4_31 34770 36050 + 2.A.40.1.4
pfam MGYG000003121_4 MGYG000003121_4_32 36183 37400 - MFS_3 | MFS_1
TF MGYG000003121_4 MGYG000003121_4_33 37472 37906 - HTH_5
TC MGYG000003121_4 MGYG000003121_4_34 38120 39007 + 2.A.9.3.2
Gene ID: MGYG000003121_4_19
Type: TC
Location: 20960 - 21181 (+)
Gene ID: MGYG000003121_4_20
Type: TC
Location: 21197 - 23041 (+)
Gene ID: MGYG000003121_4_21
Type: pfam
Location: 23305 - 23664 (+)
Gene ID: MGYG000003121_4_22
Type: TC
Location: 24330 - 25151 (+)
Gene ID: MGYG000003121_4_23
Type: TC
Location: 25136 - 26023 (+)
Gene ID: MGYG000003121_4_24
Type: TC
Location: 26016 - 26801 (+)
Gene ID: MGYG000003121_4_25
Type: pfam
Location: 26827 - 27858 (+)
Gene ID: MGYG000003121_4_26
Type: CAZyme
Location: 27874 - 28836 (+)
Gene ID: MGYG000003121_4_27
Type: TC
Location: 28843 - 30411 (+)
Gene ID: MGYG000003121_4_28
Type: pfam
Location: 30392 - 31591 (+)
Gene ID: MGYG000003121_4_29
Type: pfam
Location: 31931 - 33874 (+)
Gene ID: MGYG000003121_4_30
Type: TC
Location: 33932 - 34516 (+)
Gene ID: MGYG000003121_4_31
Type: TC
Location: 34770 - 36050 (+)
Gene ID: MGYG000003121_4_32
Type: pfam
Location: 36183 - 37400 (-)
Gene ID: MGYG000003121_4_33
Type: TF
Location: 37472 - 37906 (-)
Gene ID: MGYG000003121_4_34
Type: TC
Location: 38120 - 39007 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Staphylococcales
→
Family
Gemellaceae
→
Genus
Gemella
→
Species
Gemella sp002871655

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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