Cluster: MGYG000003118_CGC5
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003118
- CGC Family ID: CGCFAM_00036
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003118_2 | MGYG000003118_2_67 | 65540 | 66850 | - | 9.B.18.1.2 |
| pfam | MGYG000003118_2 | MGYG000003118_2_68 | 66872 | 67972 | - | Amino_oxidase | GLF | NAD_binding_8 |
| TC | MGYG000003118_2 | MGYG000003118_2_69 | 67991 | 69418 | - | 2.A.66.2.16 |
| TC | MGYG000003118_2 | MGYG000003118_2_70 | 69467 | 70774 | - | 9.B.67.2.2 |
| CAZyme | MGYG000003118_2 | MGYG000003118_2_71 | 70784 | 71833 | - | GT113 |
| CAZyme | MGYG000003118_2 | MGYG000003118_2_72 | 71856 | 72899 | - | GT2 |
| CAZyme | MGYG000003118_2 | MGYG000003118_2_73 | 72889 | 73971 | - | GT4 |
| CAZyme | MGYG000003118_2 | MGYG000003118_2_74 | 73986 | 74741 | - | GT111 |
Gene ID: MGYG000003118_2_67
Type: TC
Location: 65540 - 66850 (-)
Type: TC
Location: 65540 - 66850 (-)
Gene ID: MGYG000003118_2_68
Type: pfam
Location: 66872 - 67972 (-)
Type: pfam
Location: 66872 - 67972 (-)
Gene ID: MGYG000003118_2_69
Type: TC
Location: 67991 - 69418 (-)
Type: TC
Location: 67991 - 69418 (-)
Gene ID: MGYG000003118_2_70
Type: TC
Location: 69467 - 70774 (-)
Type: TC
Location: 69467 - 70774 (-)
Gene ID: MGYG000003118_2_71
Type: CAZyme
Location: 70784 - 71833 (-)
Type: CAZyme
Location: 70784 - 71833 (-)
Gene ID: MGYG000003118_2_72
Type: CAZyme
Location: 71856 - 72899 (-)
Type: CAZyme
Location: 71856 - 72899 (-)
Gene ID: MGYG000003118_2_73
Type: CAZyme
Location: 72889 - 73971 (-)
Type: CAZyme
Location: 72889 - 73971 (-)
Gene ID: MGYG000003118_2_74
Type: CAZyme
Location: 73986 - 74741 (-)
Type: CAZyme
Location: 73986 - 74741 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp030405845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.