Cluster: MGYG000003118_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003118
- CGC Family ID: CGCFAM_05006
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003118_1 | MGYG000003118_1_148 | 156267 | 156983 | - | 9.B.20.1.3 |
| pfam | MGYG000003118_1 | MGYG000003118_1_149 | 157110 | 158471 | + | UPF0004 | Radical_SAM | TRAM_2 |
| CAZyme | MGYG000003118_1 | MGYG000003118_1_150 | 158511 | 160514 | + | GT41 |
Gene ID: MGYG000003118_1_148
Type: TC
Location: 156267 - 156983 (-)
Type: TC
Location: 156267 - 156983 (-)
Gene ID: MGYG000003118_1_149
Type: pfam
Location: 157110 - 158471 (+)
Type: pfam
Location: 157110 - 158471 (+)
Gene ID: MGYG000003118_1_150
Type: CAZyme
Location: 158511 - 160514 (+)
Type: CAZyme
Location: 158511 - 160514 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp030405845
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.