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Cluster: MGYG000003118_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003118_19 MGYG000003118_19_9 7211 8581 + 2.A.25.1.4
pfam MGYG000003118_19 MGYG000003118_19_10 8823 9146 + Ribosomal_S30AE
TC MGYG000003118_19 MGYG000003118_19_11 9212 11512 - 1.B.14.2.1
pfam MGYG000003118_19 MGYG000003118_19_12 11669 12799 + TbpB_B_D
NULL(UNKNOWN) MGYG000003118_19 MGYG000003118_19_13 12863 13006 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000003118_19 MGYG000003118_19_14 13063 14457 - GH23
TC MGYG000003118_19 MGYG000003118_19_15 14553 16403 - 3.A.18.1.1
Gene ID: MGYG000003118_19_9
Type: TC
Location: 7211 - 8581 (+)
Gene ID: MGYG000003118_19_10
Type: pfam
Location: 8823 - 9146 (+)
Gene ID: MGYG000003118_19_11
Type: TC
Location: 9212 - 11512 (-)
Gene ID: MGYG000003118_19_12
Type: pfam
Location: 11669 - 12799 (+)
Gene ID: MGYG000003118_19_13
Type:
Location: 12863 - 13006 (-)
Gene ID: MGYG000003118_19_14
Type: CAZyme
Location: 13063 - 14457 (-)
Gene ID: MGYG000003118_19_15
Type: TC
Location: 14553 - 16403 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003118_19_13 vegetarian > omnivore 1.75049 0.01587
MGYG000003118_19_13 vegetarian > vegan 1.28049 0.01135
MGYG000003118_19_14 vegetarian > omnivore 1.49170 0.01587
MGYG000003118_19_15 vegan > omnivore 1.62464 0.00581
MGYG000003118_19_15 vegetarian > omnivore 1.02398 0.01587

🧭 Explore Read Mapping of CGC

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