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Cluster: MGYG000003118_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003118_14 MGYG000003118_14_1 1 210 + 1.C.75.1.2
pfam MGYG000003118_14 MGYG000003118_14_2 285 788 + Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_2 | Thioredoxin_8
pfam MGYG000003118_14 MGYG000003118_14_3 841 1764 + 3Beta_HSD | Epimerase | RmlD_sub_bind | GDP_Man_Dehyd
CAZyme MGYG000003118_14 MGYG000003118_14_4 1863 2906 + GT9
pfam MGYG000003118_14 MGYG000003118_14_5 2903 3808 + EamA | EamA
CAZyme MGYG000003118_14 MGYG000003118_14_6 3805 4758 + GT9
TC MGYG000003118_14 MGYG000003118_14_7 4903 5982 + 1.B.1.3.3
Gene ID: MGYG000003118_14_1
Type: TC
Location: 1 - 210 (+)
Gene ID: MGYG000003118_14_2
Type: pfam
Location: 285 - 788 (+)
Gene ID: MGYG000003118_14_3
Type: pfam
Location: 841 - 1764 (+)
Gene ID: MGYG000003118_14_4
Type: CAZyme
Location: 1863 - 2906 (+)
Gene ID: MGYG000003118_14_5
Type: pfam
Location: 2903 - 3808 (+)
Gene ID: MGYG000003118_14_6
Type: CAZyme
Location: 3805 - 4758 (+)
Gene ID: MGYG000003118_14_7
Type: TC
Location: 4903 - 5982 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003118_14_3 vegetarian > vegan 1.99290 0.01135
MGYG000003118_14_7 vegetarian > omnivore 1.62471 0.01587
MGYG000003118_14_7 vegetarian > vegan 1.46283 0.01135

🧭 Explore Read Mapping of CGC

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