Cluster: MGYG000003116_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003116
- CGC Family ID: CGCFAM_09912
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003116_1 | MGYG000003116_1_215 | 227938 | 229002 | - | GT28 |
| pfam | MGYG000003116_1 | MGYG000003116_1_216 | 229312 | 229476 | + | SASP |
| TC | MGYG000003116_1 | MGYG000003116_1_217 | 229586 | 231694 | - | 2.A.21.9.1 |
Gene ID: MGYG000003116_1_215
Type: CAZyme
Location: 227938 - 229002 (-)
Type: CAZyme
Location: 227938 - 229002 (-)
Gene ID: MGYG000003116_1_216
Type: pfam
Location: 229312 - 229476 (+)
Type: pfam
Location: 229312 - 229476 (+)
Gene ID: MGYG000003116_1_217
Type: TC
Location: 229586 - 231694 (-)
Type: TC
Location: 229586 - 231694 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium_F
Species
Clostridium_F tepidum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.