Cluster: MGYG000003116_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003116
- CGC Family ID: CGCFAM_00684
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003116_7 | MGYG000003116_7_164 | 166593 | 167699 | - | GT4 |
| pfam | MGYG000003116_7 | MGYG000003116_7_165 | 167719 | 168465 | - | Hexapep | Hexapep_2 | Hexapep_2 | Hexapep_2 |
| CAZyme | MGYG000003116_7 | MGYG000003116_7_166 | 168564 | 169673 | - | GH177 |
| pfam | MGYG000003116_7 | MGYG000003116_7_167 | 169737 | 171053 | - | UDPG_MGDP_dh | NAD_binding_2 | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| TC | MGYG000003116_7 | MGYG000003116_7_168 | 171173 | 173029 | - | 9.B.18.2.1 |
| CAZyme | MGYG000003116_7 | MGYG000003116_7_169 | 173208 | 174806 | - | GH73 |
Gene ID: MGYG000003116_7_164
Type: CAZyme
Location: 166593 - 167699 (-)
Type: CAZyme
Location: 166593 - 167699 (-)
Gene ID: MGYG000003116_7_165
Type: pfam
Location: 167719 - 168465 (-)
Type: pfam
Location: 167719 - 168465 (-)
Gene ID: MGYG000003116_7_166
Type: CAZyme
Location: 168564 - 169673 (-)
Type: CAZyme
Location: 168564 - 169673 (-)
Gene ID: MGYG000003116_7_167
Type: pfam
Location: 169737 - 171053 (-)
Type: pfam
Location: 169737 - 171053 (-)
Gene ID: MGYG000003116_7_168
Type: TC
Location: 171173 - 173029 (-)
Type: TC
Location: 171173 - 173029 (-)
Gene ID: MGYG000003116_7_169
Type: CAZyme
Location: 173208 - 174806 (-)
Type: CAZyme
Location: 173208 - 174806 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium_F
Species
Clostridium_F tepidum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.