Cluster: MGYG000003116_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003116
- CGC Family ID: CGCFAM_01922
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003116_7 | MGYG000003116_7_150 | 150076 | 151023 | + | CE4 |
| CAZyme | MGYG000003116_7 | MGYG000003116_7_151 | 151277 | 151987 | - | GT26 |
| TC | MGYG000003116_7 | MGYG000003116_7_152 | 152195 | 152848 | - | 9.B.18.1.2 |
| pfam | MGYG000003116_7 | MGYG000003116_7_153 | 152859 | 154283 | - | Polysacc_synt | Polysacc_synt_3 |
| TC | MGYG000003116_7 | MGYG000003116_7_154 | 154442 | 155998 | - | 2.A.66.4.7 |
| CAZyme | MGYG000003116_7 | MGYG000003116_7_155 | 156017 | 157123 | - | GT4 |
Gene ID: MGYG000003116_7_150
Type: CAZyme
Location: 150076 - 151023 (+)
Type: CAZyme
Location: 150076 - 151023 (+)
Gene ID: MGYG000003116_7_151
Type: CAZyme
Location: 151277 - 151987 (-)
Type: CAZyme
Location: 151277 - 151987 (-)
Gene ID: MGYG000003116_7_152
Type: TC
Location: 152195 - 152848 (-)
Type: TC
Location: 152195 - 152848 (-)
Gene ID: MGYG000003116_7_153
Type: pfam
Location: 152859 - 154283 (-)
Type: pfam
Location: 152859 - 154283 (-)
Gene ID: MGYG000003116_7_154
Type: TC
Location: 154442 - 155998 (-)
Type: TC
Location: 154442 - 155998 (-)
Gene ID: MGYG000003116_7_155
Type: CAZyme
Location: 156017 - 157123 (-)
Type: CAZyme
Location: 156017 - 157123 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium_F
Species
Clostridium_F tepidum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.