Cluster: MGYG000003113_CGC7
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003113
- CGC Family ID: CGCFAM_00922
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003113_4 | MGYG000003113_4_19 | 29159 | 30715 | - | 3.B.1.1.5 |
| sulfatase | MGYG000003113_4 | MGYG000003113_4_20 | 30712 | 32505 | - | S1_37 |
| pfam | MGYG000003113_4 | MGYG000003113_4_21 | 32492 | 33376 | - | BPL_C | BPL_LplA_LipB |
| TC | MGYG000003113_4 | MGYG000003113_4_22 | 33695 | 35377 | + | 3.A.1.120.6 |
| pfam | MGYG000003113_4 | MGYG000003113_4_23 | 35644 | 35934 | + | PTS_EIIB |
| CAZyme | MGYG000003113_4 | MGYG000003113_4_24 | 35969 | 38119 | + | GH77 |
| TC | MGYG000003113_4 | MGYG000003113_4_25 | 38192 | 38665 | - | 4.A.1.2.6 |
| TC | MGYG000003113_4 | MGYG000003113_4_26 | 38662 | 38892 | - | 4.A.1.1.1 |
| TC | MGYG000003113_4 | MGYG000003113_4_27 | 38999 | 40261 | - | 2.A.1.21.21 |
| pfam | MGYG000003113_4 | MGYG000003113_4_28 | 40258 | 41157 | - | S6PP | Hydrolase_3 |
| CAZyme | MGYG000003113_4 | MGYG000003113_4_29 | 41225 | 43747 | + | GH3 |
| NULL(UNKNOWN) | MGYG000003113_4 | MGYG000003113_4_30 | 43791 | 44402 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003113_4 | MGYG000003113_4_31 | 44434 | 45444 | + | GT2 |
Gene ID: MGYG000003113_4_19
Type: TC
Location: 29159 - 30715 (-)
Type: TC
Location: 29159 - 30715 (-)
Gene ID: MGYG000003113_4_20
Type: sulfatase
Location: 30712 - 32505 (-)
Type: sulfatase
Location: 30712 - 32505 (-)
Gene ID: MGYG000003113_4_21
Type: pfam
Location: 32492 - 33376 (-)
Type: pfam
Location: 32492 - 33376 (-)
Gene ID: MGYG000003113_4_22
Type: TC
Location: 33695 - 35377 (+)
Type: TC
Location: 33695 - 35377 (+)
Gene ID: MGYG000003113_4_23
Type: pfam
Location: 35644 - 35934 (+)
Type: pfam
Location: 35644 - 35934 (+)
Gene ID: MGYG000003113_4_24
Type: CAZyme
Location: 35969 - 38119 (+)
Type: CAZyme
Location: 35969 - 38119 (+)
Gene ID: MGYG000003113_4_25
Type: TC
Location: 38192 - 38665 (-)
Type: TC
Location: 38192 - 38665 (-)
Gene ID: MGYG000003113_4_26
Type: TC
Location: 38662 - 38892 (-)
Type: TC
Location: 38662 - 38892 (-)
Gene ID: MGYG000003113_4_27
Type: TC
Location: 38999 - 40261 (-)
Type: TC
Location: 38999 - 40261 (-)
Gene ID: MGYG000003113_4_28
Type: pfam
Location: 40258 - 41157 (-)
Type: pfam
Location: 40258 - 41157 (-)
Gene ID: MGYG000003113_4_29
Type: CAZyme
Location: 41225 - 43747 (+)
Type: CAZyme
Location: 41225 - 43747 (+)
Gene ID: MGYG000003113_4_30
Type:
Location: 43791 - 44402 (+)
Type:
Location: 43791 - 44402 (+)
Gene ID: MGYG000003113_4_31
Type: CAZyme
Location: 44434 - 45444 (+)
Type: CAZyme
Location: 44434 - 45444 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Pauljensenia
Species
Pauljensenia sp001838165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.