Cluster: MGYG000003099_CGC23
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 8
- Substrate:
- Genome ID: MGYG000003099
- CGC Family ID: CGCFAM_01916
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003099_6 | MGYG000003099_6_40 | 51076 | 53349 | + | GH92 |
| CAZyme | MGYG000003099_6 | MGYG000003099_6_41 | 53372 | 55570 | + | GH92 |
| TC | MGYG000003099_6 | MGYG000003099_6_42 | 55594 | 58650 | + | 1.B.14.6.1 |
| pfam | MGYG000003099_6 | MGYG000003099_6_43 | 58662 | 60545 | + | SusD_RagB | SusD-like_3 |
| pfam | MGYG000003099_6 | MGYG000003099_6_44 | 60605 | 61345 | + | DUF3823 | DUF3823_C |
| CAZyme | MGYG000003099_6 | MGYG000003099_6_45 | 61391 | 63955 | + | GH3 |
| CAZyme | MGYG000003099_6 | MGYG000003099_6_46 | 63966 | 66740 | + | CBM6 |
| pfam | MGYG000003099_6 | MGYG000003099_6_47 | 67007 | 68662 | + | CBM_6 | CBM_6 | DUF6383 |
| CAZyme | MGYG000003099_6 | MGYG000003099_6_48 | 68730 | 69773 | + | GH43_34 |
| CAZyme | MGYG000003099_6 | MGYG000003099_6_49 | 69790 | 72408 | + | GH3 |
| TC | MGYG000003099_6 | MGYG000003099_6_50 | 72659 | 74068 | + | 1.I.1.1.3 |
| pfam | MGYG000003099_6 | MGYG000003099_6_51 | 74222 | 75136 | + | LPG_synthase_C |
| pfam | MGYG000003099_6 | MGYG000003099_6_52 | 75136 | 76173 | + | Acetyltransf_1 | Acetyltransf_9 | SCP2_2 |
| CAZyme | MGYG000003099_6 | MGYG000003099_6_53 | 76376 | 78493 | - | GH97 |
| CAZyme | MGYG000003099_6 | MGYG000003099_6_54 | 78512 | 79915 | - | GH27 |
| pfam | MGYG000003099_6 | MGYG000003099_6_55 | 79968 | 81515 | - | SusF_SusE | SusF_SusE | SusF_SusE | SusF_SusE |
| pfam | MGYG000003099_6 | MGYG000003099_6_56 | 81549 | 83285 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000003099_6 | MGYG000003099_6_57 | 83312 | 86299 | - | 1.B.14.6.1 |
Gene ID: MGYG000003099_6_40
Type: CAZyme
Location: 51076 - 53349 (+)
Type: CAZyme
Location: 51076 - 53349 (+)
Gene ID: MGYG000003099_6_41
Type: CAZyme
Location: 53372 - 55570 (+)
Type: CAZyme
Location: 53372 - 55570 (+)
Gene ID: MGYG000003099_6_42
Type: TC
Location: 55594 - 58650 (+)
Type: TC
Location: 55594 - 58650 (+)
Gene ID: MGYG000003099_6_43
Type: pfam
Location: 58662 - 60545 (+)
Type: pfam
Location: 58662 - 60545 (+)
Gene ID: MGYG000003099_6_44
Type: pfam
Location: 60605 - 61345 (+)
Type: pfam
Location: 60605 - 61345 (+)
Gene ID: MGYG000003099_6_45
Type: CAZyme
Location: 61391 - 63955 (+)
Type: CAZyme
Location: 61391 - 63955 (+)
Gene ID: MGYG000003099_6_46
Type: CAZyme
Location: 63966 - 66740 (+)
Type: CAZyme
Location: 63966 - 66740 (+)
Gene ID: MGYG000003099_6_47
Type: pfam
Location: 67007 - 68662 (+)
Type: pfam
Location: 67007 - 68662 (+)
Gene ID: MGYG000003099_6_48
Type: CAZyme
Location: 68730 - 69773 (+)
Type: CAZyme
Location: 68730 - 69773 (+)
Gene ID: MGYG000003099_6_49
Type: CAZyme
Location: 69790 - 72408 (+)
Type: CAZyme
Location: 69790 - 72408 (+)
Gene ID: MGYG000003099_6_50
Type: TC
Location: 72659 - 74068 (+)
Type: TC
Location: 72659 - 74068 (+)
Gene ID: MGYG000003099_6_51
Type: pfam
Location: 74222 - 75136 (+)
Type: pfam
Location: 74222 - 75136 (+)
Gene ID: MGYG000003099_6_52
Type: pfam
Location: 75136 - 76173 (+)
Type: pfam
Location: 75136 - 76173 (+)
Gene ID: MGYG000003099_6_53
Type: CAZyme
Location: 76376 - 78493 (-)
Type: CAZyme
Location: 76376 - 78493 (-)
Gene ID: MGYG000003099_6_54
Type: CAZyme
Location: 78512 - 79915 (-)
Type: CAZyme
Location: 78512 - 79915 (-)
Gene ID: MGYG000003099_6_55
Type: pfam
Location: 79968 - 81515 (-)
Type: pfam
Location: 79968 - 81515 (-)
Gene ID: MGYG000003099_6_56
Type: pfam
Location: 81549 - 83285 (-)
Type: pfam
Location: 81549 - 83285 (-)
Gene ID: MGYG000003099_6_57
Type: TC
Location: 83312 - 86299 (-)
Type: TC
Location: 83312 - 86299 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Barnesiellaceae
Genus
UMGS27
Species
UMGS27 sp900538555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.