Cluster: MGYG000003099_CGC20
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000003099
- CGC Family ID: CGCFAM_01483
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003099_5 | MGYG000003099_5_122 | 170660 | 172822 | - | 2.A.37.2.5 |
| NULL(UNKNOWN) | MGYG000003099_5 | MGYG000003099_5_123 | 173076 | 173333 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003099_5 | MGYG000003099_5_124 | 173368 | 175614 | - | GH36 |
| NULL(UNKNOWN) | MGYG000003099_5 | MGYG000003099_5_125 | 175620 | 175889 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003099_5 | MGYG000003099_5_126 | 175897 | 178110 | - | GH3 |
| CAZyme | MGYG000003099_5 | MGYG000003099_5_127 | 178206 | 179192 | - | GH43_3 |
| pfam | MGYG000003099_5 | MGYG000003099_5_128 | 179314 | 181113 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000003099_5 | MGYG000003099_5_129 | 181235 | 184756 | - | 1.B.14.6.1 |
| STP | MGYG000003099_5 | MGYG000003099_5_130 | 184800 | 185813 | - | FecR |
| TF | MGYG000003099_5 | MGYG000003099_5_131 | 185855 | 186409 | - | GerE |
| CAZyme | MGYG000003099_5 | MGYG000003099_5_132 | 186430 | 188274 | - | GH43_3 |
| CAZyme | MGYG000003099_5 | MGYG000003099_5_133 | 188271 | 189725 | - | CE20 |
| CAZyme | MGYG000003099_5 | MGYG000003099_5_134 | 189779 | 190819 | - | GH43_3 |
| NULL(UNKNOWN) | MGYG000003099_5 | MGYG000003099_5_135 | 191167 | 192198 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000003099_5 | MGYG000003099_5_136 | 192547 | 193557 | + | Semialdhyde_dh | Semialdhyde_dhC |
| TC | MGYG000003099_5 | MGYG000003099_5_137 | 193664 | 195031 | - | 2.A.66.1.37 |
Gene ID: MGYG000003099_5_122
Type: TC
Location: 170660 - 172822 (-)
Type: TC
Location: 170660 - 172822 (-)
Gene ID: MGYG000003099_5_123
Type:
Location: 173076 - 173333 (+)
Type:
Location: 173076 - 173333 (+)
Gene ID: MGYG000003099_5_124
Type: CAZyme
Location: 173368 - 175614 (-)
Type: CAZyme
Location: 173368 - 175614 (-)
Gene ID: MGYG000003099_5_125
Type:
Location: 175620 - 175889 (-)
Type:
Location: 175620 - 175889 (-)
Gene ID: MGYG000003099_5_126
Type: CAZyme
Location: 175897 - 178110 (-)
Type: CAZyme
Location: 175897 - 178110 (-)
Gene ID: MGYG000003099_5_127
Type: CAZyme
Location: 178206 - 179192 (-)
Type: CAZyme
Location: 178206 - 179192 (-)
Gene ID: MGYG000003099_5_128
Type: pfam
Location: 179314 - 181113 (-)
Type: pfam
Location: 179314 - 181113 (-)
Gene ID: MGYG000003099_5_129
Type: TC
Location: 181235 - 184756 (-)
Type: TC
Location: 181235 - 184756 (-)
Gene ID: MGYG000003099_5_130
Type: STP
Location: 184800 - 185813 (-)
Type: STP
Location: 184800 - 185813 (-)
Gene ID: MGYG000003099_5_131
Type: TF
Location: 185855 - 186409 (-)
Type: TF
Location: 185855 - 186409 (-)
Gene ID: MGYG000003099_5_132
Type: CAZyme
Location: 186430 - 188274 (-)
Type: CAZyme
Location: 186430 - 188274 (-)
Gene ID: MGYG000003099_5_133
Type: CAZyme
Location: 188271 - 189725 (-)
Type: CAZyme
Location: 188271 - 189725 (-)
Gene ID: MGYG000003099_5_134
Type: CAZyme
Location: 189779 - 190819 (-)
Type: CAZyme
Location: 189779 - 190819 (-)
Gene ID: MGYG000003099_5_135
Type:
Location: 191167 - 192198 (-)
Type:
Location: 191167 - 192198 (-)
Gene ID: MGYG000003099_5_136
Type: pfam
Location: 192547 - 193557 (+)
Type: pfam
Location: 192547 - 193557 (+)
Gene ID: MGYG000003099_5_137
Type: TC
Location: 193664 - 195031 (-)
Type: TC
Location: 193664 - 195031 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Barnesiellaceae
Genus
UMGS27
Species
UMGS27 sp900538555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.