Cluster: MGYG000003094_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003094
- CGC Family ID: CGCFAM_06252
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003094_3 | MGYG000003094_3_69 | 82452 | 85334 | + | GH31_4 |
| pfam | MGYG000003094_3 | MGYG000003094_3_70 | 85587 | 86798 | - | PepSY_TM |
| pfam | MGYG000003094_3 | MGYG000003094_3_71 | 86894 | 88327 | - | DUF4374 |
| TC | MGYG000003094_3 | MGYG000003094_3_72 | 88357 | 90726 | - | 1.B.14.3.1 |
| CAZyme | MGYG000003094_3 | MGYG000003094_3_73 | 91232 | 93490 | + | CBM32 | GH29 |
| peptidase | MGYG000003094_3 | MGYG000003094_3_74 | 93687 | 96137 | + | S09.UPB |
| TC | MGYG000003094_3 | MGYG000003094_3_75 | 96364 | 97662 | + | 9.A.40.2.1 |
Gene ID: MGYG000003094_3_69
Type: CAZyme
Location: 82452 - 85334 (+)
Type: CAZyme
Location: 82452 - 85334 (+)
Gene ID: MGYG000003094_3_70
Type: pfam
Location: 85587 - 86798 (-)
Type: pfam
Location: 85587 - 86798 (-)
Gene ID: MGYG000003094_3_71
Type: pfam
Location: 86894 - 88327 (-)
Type: pfam
Location: 86894 - 88327 (-)
Gene ID: MGYG000003094_3_72
Type: TC
Location: 88357 - 90726 (-)
Type: TC
Location: 88357 - 90726 (-)
Gene ID: MGYG000003094_3_73
Type: CAZyme
Location: 91232 - 93490 (+)
Type: CAZyme
Location: 91232 - 93490 (+)
Gene ID: MGYG000003094_3_74
Type: peptidase
Location: 93687 - 96137 (+)
Type: peptidase
Location: 93687 - 96137 (+)
Gene ID: MGYG000003094_3_75
Type: TC
Location: 96364 - 97662 (+)
Type: TC
Location: 96364 - 97662 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola barnesiae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003094_3_69 | vegan > omnivore | 1.00150 | 0.02695 |