Cluster: MGYG000003094_CGC37
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: beta-mannan
- Genome ID: MGYG000003094
- CGC Family ID: CGCFAM_00082
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003094_31 | MGYG000003094_31_19 | 22107 | 24782 | - | GH3 |
| CAZyme | MGYG000003094_31 | MGYG000003094_31_20 | 24938 | 27289 | - | GH3 |
| CAZyme | MGYG000003094_31 | MGYG000003094_31_21 | 27331 | 30600 | - | GH3 | GH5_38 |
| NULL(UNKNOWN) | MGYG000003094_31 | MGYG000003094_31_22 | 30702 | 31961 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003094_31 | MGYG000003094_31_23 | 31980 | 33626 | - | 8.A.46.2.2 |
| TC | MGYG000003094_31 | MGYG000003094_31_24 | 33665 | 35977 | - | 1.B.14.6.2 |
Gene ID: MGYG000003094_31_19
Type: CAZyme
Location: 22107 - 24782 (-)
Type: CAZyme
Location: 22107 - 24782 (-)
Gene ID: MGYG000003094_31_20
Type: CAZyme
Location: 24938 - 27289 (-)
Type: CAZyme
Location: 24938 - 27289 (-)
Gene ID: MGYG000003094_31_21
Type: CAZyme
Location: 27331 - 30600 (-)
Type: CAZyme
Location: 27331 - 30600 (-)
Gene ID: MGYG000003094_31_22
Type:
Location: 30702 - 31961 (-)
Type:
Location: 30702 - 31961 (-)
Gene ID: MGYG000003094_31_23
Type: TC
Location: 31980 - 33626 (-)
Type: TC
Location: 31980 - 33626 (-)
Gene ID: MGYG000003094_31_24
Type: TC
Location: 33665 - 35977 (-)
Type: TC
Location: 33665 - 35977 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola barnesiae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.