Cluster: MGYG000003094_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003094
- CGC Family ID: CGCFAM_10833
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003094_3 | MGYG000003094_3_26 | 29673 | 30551 | + | CE1 |
| CAZyme | MGYG000003094_3 | MGYG000003094_3_27 | 30572 | 31780 | + | CE1 |
| CAZyme | MGYG000003094_3 | MGYG000003094_3_28 | 31833 | 34139 | + | GH3 |
| CAZyme | MGYG000003094_3 | MGYG000003094_3_29 | 34238 | 36724 | + | GH3 |
| pfam | MGYG000003094_3 | MGYG000003094_3_30 | 36917 | 38719 | - | DUF349 | DUF349 | DUF349 | DUF349 | DUF349 |
| TC | MGYG000003094_3 | MGYG000003094_3_31 | 39010 | 40350 | - | 1.A.26.1.2 |
Gene ID: MGYG000003094_3_26
Type: CAZyme
Location: 29673 - 30551 (+)
Type: CAZyme
Location: 29673 - 30551 (+)
Gene ID: MGYG000003094_3_27
Type: CAZyme
Location: 30572 - 31780 (+)
Type: CAZyme
Location: 30572 - 31780 (+)
Gene ID: MGYG000003094_3_28
Type: CAZyme
Location: 31833 - 34139 (+)
Type: CAZyme
Location: 31833 - 34139 (+)
Gene ID: MGYG000003094_3_29
Type: CAZyme
Location: 34238 - 36724 (+)
Type: CAZyme
Location: 34238 - 36724 (+)
Gene ID: MGYG000003094_3_30
Type: pfam
Location: 36917 - 38719 (-)
Type: pfam
Location: 36917 - 38719 (-)
Gene ID: MGYG000003094_3_31
Type: TC
Location: 39010 - 40350 (-)
Type: TC
Location: 39010 - 40350 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola barnesiae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.