Cluster: MGYG000003094_CGC21
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate: fructan
- Genome ID: MGYG000003094
- CGC Family ID: CGCFAM_00017
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003094_12 | MGYG000003094_12_3 | 2568 | 3728 | - | 2.A.1.7.17 |
| CAZyme | MGYG000003094_12 | MGYG000003094_12_4 | 3805 | 5613 | - | GH32 |
| pfam | MGYG000003094_12 | MGYG000003094_12_5 | 5691 | 7430 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000003094_12 | MGYG000003094_12_6 | 7445 | 10567 | - | 1.B.14.6.1 |
| STP | MGYG000003094_12 | MGYG000003094_12_7 | 11355 | 12251 | - | PfkB |
| TC | MGYG000003094_12 | MGYG000003094_12_8 | 12256 | 13416 | - | 2.A.1.7.17 |
| CAZyme | MGYG000003094_12 | MGYG000003094_12_9 | 13513 | 15384 | - | GH32 |
| NULL(UNKNOWN) | MGYG000003094_12 | MGYG000003094_12_10 | 15513 | 17861 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000003094_12 | MGYG000003094_12_11 | 18385 | 19218 | - | LGT |
| CAZyme | MGYG000003094_12 | MGYG000003094_12_12 | 19385 | 21895 | - | GH2 |
Gene ID: MGYG000003094_12_3
Type: TC
Location: 2568 - 3728 (-)
Type: TC
Location: 2568 - 3728 (-)
Gene ID: MGYG000003094_12_4
Type: CAZyme
Location: 3805 - 5613 (-)
Type: CAZyme
Location: 3805 - 5613 (-)
Gene ID: MGYG000003094_12_5
Type: pfam
Location: 5691 - 7430 (-)
Type: pfam
Location: 5691 - 7430 (-)
Gene ID: MGYG000003094_12_6
Type: TC
Location: 7445 - 10567 (-)
Type: TC
Location: 7445 - 10567 (-)
Gene ID: MGYG000003094_12_7
Type: STP
Location: 11355 - 12251 (-)
Type: STP
Location: 11355 - 12251 (-)
Gene ID: MGYG000003094_12_8
Type: TC
Location: 12256 - 13416 (-)
Type: TC
Location: 12256 - 13416 (-)
Gene ID: MGYG000003094_12_9
Type: CAZyme
Location: 13513 - 15384 (-)
Type: CAZyme
Location: 13513 - 15384 (-)
Gene ID: MGYG000003094_12_10
Type:
Location: 15513 - 17861 (-)
Type:
Location: 15513 - 17861 (-)
Gene ID: MGYG000003094_12_11
Type: pfam
Location: 18385 - 19218 (-)
Type: pfam
Location: 18385 - 19218 (-)
Gene ID: MGYG000003094_12_12
Type: CAZyme
Location: 19385 - 21895 (-)
Type: CAZyme
Location: 19385 - 21895 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola barnesiae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.