Cluster: MGYG000003094_CGC11
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000003094
- CGC Family ID: CGCFAM_07542
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003094_6 | MGYG000003094_6_41 | 55565 | 57847 | - | GH92 |
| CAZyme | MGYG000003094_6 | MGYG000003094_6_42 | 57860 | 60175 | - | GH92 |
| CAZyme | MGYG000003094_6 | MGYG000003094_6_43 | 60199 | 62412 | - | GH92 |
| pfam | MGYG000003094_6 | MGYG000003094_6_44 | 62671 | 64437 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000003094_6 | MGYG000003094_6_45 | 64451 | 67684 | - | 1.B.14.6.1 |
| CAZyme | MGYG000003094_6 | MGYG000003094_6_46 | 68048 | 70402 | - | GH3 |
| CAZyme | MGYG000003094_6 | MGYG000003094_6_47 | 70415 | 71809 | - | GH29 |
| CAZyme | MGYG000003094_6 | MGYG000003094_6_48 | 71828 | 73207 | - | GH29 |
| CAZyme | MGYG000003094_6 | MGYG000003094_6_49 | 73230 | 75161 | - | GH33 |
| NULL(UNKNOWN) | MGYG000003094_6 | MGYG000003094_6_50 | 75209 | 75319 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000003094_6 | MGYG000003094_6_51 | 75478 | 76158 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003094_6 | MGYG000003094_6_52 | 76245 | 78191 | - | 8.A.46.2.2 |
| TC | MGYG000003094_6 | MGYG000003094_6_53 | 78207 | 81626 | - | 1.B.14.6.2 |
Gene ID: MGYG000003094_6_41
Type: CAZyme
Location: 55565 - 57847 (-)
Type: CAZyme
Location: 55565 - 57847 (-)
Gene ID: MGYG000003094_6_42
Type: CAZyme
Location: 57860 - 60175 (-)
Type: CAZyme
Location: 57860 - 60175 (-)
Gene ID: MGYG000003094_6_43
Type: CAZyme
Location: 60199 - 62412 (-)
Type: CAZyme
Location: 60199 - 62412 (-)
Gene ID: MGYG000003094_6_44
Type: pfam
Location: 62671 - 64437 (-)
Type: pfam
Location: 62671 - 64437 (-)
Gene ID: MGYG000003094_6_45
Type: TC
Location: 64451 - 67684 (-)
Type: TC
Location: 64451 - 67684 (-)
Gene ID: MGYG000003094_6_46
Type: CAZyme
Location: 68048 - 70402 (-)
Type: CAZyme
Location: 68048 - 70402 (-)
Gene ID: MGYG000003094_6_47
Type: CAZyme
Location: 70415 - 71809 (-)
Type: CAZyme
Location: 70415 - 71809 (-)
Gene ID: MGYG000003094_6_48
Type: CAZyme
Location: 71828 - 73207 (-)
Type: CAZyme
Location: 71828 - 73207 (-)
Gene ID: MGYG000003094_6_49
Type: CAZyme
Location: 73230 - 75161 (-)
Type: CAZyme
Location: 73230 - 75161 (-)
Gene ID: MGYG000003094_6_50
Type:
Location: 75209 - 75319 (-)
Type:
Location: 75209 - 75319 (-)
Gene ID: MGYG000003094_6_51
Type:
Location: 75478 - 76158 (-)
Type:
Location: 75478 - 76158 (-)
Gene ID: MGYG000003094_6_52
Type: TC
Location: 76245 - 78191 (-)
Type: TC
Location: 76245 - 78191 (-)
Gene ID: MGYG000003094_6_53
Type: TC
Location: 78207 - 81626 (-)
Type: TC
Location: 78207 - 81626 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola barnesiae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.