Cluster: MGYG000003083_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003083
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003083_5 | MGYG000003083_5_50 | 63397 | 65733 | - | 9.A.8.1.6 |
| TC | MGYG000003083_5 | MGYG000003083_5_51 | 65857 | 66078 | - | 9.A.8.1.6 |
| STP | MGYG000003083_5 | MGYG000003083_5_52 | 66118 | 66360 | - | FeoA |
| STP | MGYG000003083_5 | MGYG000003083_5_53 | 66597 | 66845 | - | PTS-HPr |
| TC | MGYG000003083_5 | MGYG000003083_5_54 | 67268 | 68731 | - | 2.A.3.7.4 |
| NULL(UNKNOWN) | MGYG000003083_5 | MGYG000003083_5_55 | 68885 | 69340 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003083_5 | MGYG000003083_5_56 | 69344 | 72352 | - | GH2 |
Gene ID: MGYG000003083_5_50
Type: TC
Location: 63397 - 65733 (-)
Type: TC
Location: 63397 - 65733 (-)
Gene ID: MGYG000003083_5_51
Type: TC
Location: 65857 - 66078 (-)
Type: TC
Location: 65857 - 66078 (-)
Gene ID: MGYG000003083_5_52
Type: STP
Location: 66118 - 66360 (-)
Type: STP
Location: 66118 - 66360 (-)
Gene ID: MGYG000003083_5_53
Type: STP
Location: 66597 - 66845 (-)
Type: STP
Location: 66597 - 66845 (-)
Gene ID: MGYG000003083_5_54
Type: TC
Location: 67268 - 68731 (-)
Type: TC
Location: 67268 - 68731 (-)
Gene ID: MGYG000003083_5_55
Type:
Location: 68885 - 69340 (-)
Type:
Location: 68885 - 69340 (-)
Gene ID: MGYG000003083_5_56
Type: CAZyme
Location: 69344 - 72352 (-)
Type: CAZyme
Location: 69344 - 72352 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900541875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.