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Cluster: MGYG000003081_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003081_1 MGYG000003081_1_40 46185 47354 - CE9
STP MGYG000003081_1 MGYG000003081_1_41 47472 48638 - SIS | SIS
TF MGYG000003081_1 MGYG000003081_1_42 48753 49484 - GntR
TC MGYG000003081_1 MGYG000003081_1_43 49670 50752 - 4.A.6.1.4
TC MGYG000003081_1 MGYG000003081_1_44 50742 51542 - 4.A.6.1.4
TC MGYG000003081_1 MGYG000003081_1_45 51633 52115 - 4.A.6.1.4
pfam MGYG000003081_1 MGYG000003081_1_46 52152 52433 - YajC
TC MGYG000003081_1 MGYG000003081_1_47 52433 52876 - 4.A.6.1.16
Gene ID: MGYG000003081_1_40
Type: CAZyme
Location: 46185 - 47354 (-)
Gene ID: MGYG000003081_1_41
Type: STP
Location: 47472 - 48638 (-)
Gene ID: MGYG000003081_1_42
Type: TF
Location: 48753 - 49484 (-)
Gene ID: MGYG000003081_1_43
Type: TC
Location: 49670 - 50752 (-)
Gene ID: MGYG000003081_1_44
Type: TC
Location: 50742 - 51542 (-)
Gene ID: MGYG000003081_1_45
Type: TC
Location: 51633 - 52115 (-)
Gene ID: MGYG000003081_1_46
Type: pfam
Location: 52152 - 52433 (-)
Gene ID: MGYG000003081_1_47
Type: TC
Location: 52433 - 52876 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003081_1_46 vegan > omnivore 1.10978 0.00863

🧭 Explore Read Mapping of CGC

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