Cluster: MGYG000003079_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003079
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003079_14 | MGYG000003079_14_21 | 29122 | 31449 | - | 9.A.8.1.6 |
| TC | MGYG000003079_14 | MGYG000003079_14_22 | 31573 | 31794 | - | 9.A.8.1.6 |
| STP | MGYG000003079_14 | MGYG000003079_14_23 | 31834 | 32076 | - | FeoA |
| STP | MGYG000003079_14 | MGYG000003079_14_24 | 32270 | 32518 | - | PTS-HPr |
| TC | MGYG000003079_14 | MGYG000003079_14_25 | 32940 | 34403 | - | 2.A.3.7.4 |
| NULL(UNKNOWN) | MGYG000003079_14 | MGYG000003079_14_26 | 34557 | 35012 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003079_14 | MGYG000003079_14_27 | 35016 | 38024 | - | GH2 |
Gene ID: MGYG000003079_14_21
Type: TC
Location: 29122 - 31449 (-)
Type: TC
Location: 29122 - 31449 (-)
Gene ID: MGYG000003079_14_22
Type: TC
Location: 31573 - 31794 (-)
Type: TC
Location: 31573 - 31794 (-)
Gene ID: MGYG000003079_14_23
Type: STP
Location: 31834 - 32076 (-)
Type: STP
Location: 31834 - 32076 (-)
Gene ID: MGYG000003079_14_24
Type: STP
Location: 32270 - 32518 (-)
Type: STP
Location: 32270 - 32518 (-)
Gene ID: MGYG000003079_14_25
Type: TC
Location: 32940 - 34403 (-)
Type: TC
Location: 32940 - 34403 (-)
Gene ID: MGYG000003079_14_26
Type:
Location: 34557 - 35012 (-)
Type:
Location: 34557 - 35012 (-)
Gene ID: MGYG000003079_14_27
Type: CAZyme
Location: 35016 - 38024 (-)
Type: CAZyme
Location: 35016 - 38024 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900539035
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.