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Cluster: MGYG000003079_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003079_19 MGYG000003079_19_14 14403 14741 - 4.A.3.1.2
TF MGYG000003079_19 MGYG000003079_19_15 14956 15960 - LacI
TC MGYG000003079_19 MGYG000003079_19_16 16317 18083 + 4.A.3.1.1
CAZyme MGYG000003079_19 MGYG000003079_19_17 18150 19589 + GH1
TF MGYG000003079_19 MGYG000003079_19_18 19857 20894 - LacI
CAZyme MGYG000003079_19 MGYG000003079_19_19 21236 22678 + GH1
TC MGYG000003079_19 MGYG000003079_19_20 22854 24614 + 4.A.3.1.1
TF MGYG000003079_19 MGYG000003079_19_21 24788 25798 - LacI
TC MGYG000003079_19 MGYG000003079_19_22 26074 27852 + 4.A.3.1.1
CAZyme MGYG000003079_19 MGYG000003079_19_23 27928 29349 + GH1
Gene ID: MGYG000003079_19_14
Type: TC
Location: 14403 - 14741 (-)
Gene ID: MGYG000003079_19_15
Type: TF
Location: 14956 - 15960 (-)
Gene ID: MGYG000003079_19_16
Type: TC
Location: 16317 - 18083 (+)
Gene ID: MGYG000003079_19_17
Type: CAZyme
Location: 18150 - 19589 (+)
Gene ID: MGYG000003079_19_18
Type: TF
Location: 19857 - 20894 (-)
Gene ID: MGYG000003079_19_19
Type: CAZyme
Location: 21236 - 22678 (+)
Gene ID: MGYG000003079_19_20
Type: TC
Location: 22854 - 24614 (+)
Gene ID: MGYG000003079_19_21
Type: TF
Location: 24788 - 25798 (-)
Gene ID: MGYG000003079_19_22
Type: TC
Location: 26074 - 27852 (+)
Gene ID: MGYG000003079_19_23
Type: CAZyme
Location: 27928 - 29349 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003079_19_18 vegetarian > omnivore 1.01420 0.02258

🧭 Explore Read Mapping of CGC

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