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Cluster: MGYG000003075_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003075_10 MGYG000003075_10_37 38813 40276 + 2.A.3.2.3
TC MGYG000003075_10 MGYG000003075_10_38 40915 43275 + 9.A.8.1.6
TC MGYG000003075_10 MGYG000003075_10_39 43591 45255 + 4.A.1.1.3
TF MGYG000003075_10 MGYG000003075_10_40 45318 46070 - HTH_6
CAZyme MGYG000003075_10 MGYG000003075_10_41 46246 47619 + GH4
NULL(UNKNOWN) MGYG000003075_10 MGYG000003075_10_42 47785 48537 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000003075_10 MGYG000003075_10_43 48713 49909 + 2.A.1.2.18
CAZyme MGYG000003075_10 MGYG000003075_10_44 50063 51439 + GH13_20
Gene ID: MGYG000003075_10_37
Type: TC
Location: 38813 - 40276 (+)
Gene ID: MGYG000003075_10_38
Type: TC
Location: 40915 - 43275 (+)
Gene ID: MGYG000003075_10_39
Type: TC
Location: 43591 - 45255 (+)
Gene ID: MGYG000003075_10_40
Type: TF
Location: 45318 - 46070 (-)
Gene ID: MGYG000003075_10_41
Type: CAZyme
Location: 46246 - 47619 (+)
Gene ID: MGYG000003075_10_42
Type:
Location: 47785 - 48537 (+)
Gene ID: MGYG000003075_10_43
Type: TC
Location: 48713 - 49909 (+)
Gene ID: MGYG000003075_10_44
Type: CAZyme
Location: 50063 - 51439 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003075_10_37 vegan > omnivore 1.52384 0.01416
MGYG000003075_10_41 vegan > omnivore 1.23269 0.01416
MGYG000003075_10_42 vegan > omnivore 1.48551 0.01416

🧭 Explore Read Mapping of CGC

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