Cluster: MGYG000003073_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003073
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003073_16 | MGYG000003073_16_15 | 14821 | 16179 | - | 2.A.33.1.1 |
| pfam | MGYG000003073_16 | MGYG000003073_16_16 | 16447 | 17370 | - | DHH | DHHA2 |
| STP | MGYG000003073_16 | MGYG000003073_16_17 | 17539 | 18492 | - | Glucokinase |
| TC | MGYG000003073_16 | MGYG000003073_16_18 | 18734 | 19066 | - | 4.A.3.2.3 |
| TC | MGYG000003073_16 | MGYG000003073_16_19 | 19076 | 19378 | - | 4.A.3.2.9 |
| TC | MGYG000003073_16 | MGYG000003073_16_20 | 19539 | 20882 | - | 4.A.3.2.9 |
| CAZyme | MGYG000003073_16 | MGYG000003073_16_21 | 21003 | 22403 | - | GH1 |
Gene ID: MGYG000003073_16_15
Type: TC
Location: 14821 - 16179 (-)
Type: TC
Location: 14821 - 16179 (-)
Gene ID: MGYG000003073_16_16
Type: pfam
Location: 16447 - 17370 (-)
Type: pfam
Location: 16447 - 17370 (-)
Gene ID: MGYG000003073_16_17
Type: STP
Location: 17539 - 18492 (-)
Type: STP
Location: 17539 - 18492 (-)
Gene ID: MGYG000003073_16_18
Type: TC
Location: 18734 - 19066 (-)
Type: TC
Location: 18734 - 19066 (-)
Gene ID: MGYG000003073_16_19
Type: TC
Location: 19076 - 19378 (-)
Type: TC
Location: 19076 - 19378 (-)
Gene ID: MGYG000003073_16_20
Type: TC
Location: 19539 - 20882 (-)
Type: TC
Location: 19539 - 20882 (-)
Gene ID: MGYG000003073_16_21
Type: CAZyme
Location: 21003 - 22403 (-)
Type: CAZyme
Location: 21003 - 22403 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900546085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003073_16_19 | vegan > omnivore | 1.08869 | 0.01560 |