Cluster: MGYG000003073_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003073
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003073_7 | MGYG000003073_7_21 | 21742 | 22278 | - | 4.A.1.2.6 |
| CAZyme | MGYG000003073_7 | MGYG000003073_7_22 | 22419 | 23867 | - | GH1 |
| TF | MGYG000003073_7 | MGYG000003073_7_23 | 24035 | 25027 | - | 0035607 |
| CAZyme | MGYG000003073_7 | MGYG000003073_7_24 | 25142 | 27733 | + | GH106 |
| TF | MGYG000003073_7 | MGYG000003073_7_25 | 27899 | 28753 | + | HTH_6 |
| STP | MGYG000003073_7 | MGYG000003073_7_26 | 29098 | 29778 | - | Pribosyltran |
| TC | MGYG000003073_7 | MGYG000003073_7_27 | 30216 | 32984 | + | 3.A.3.4.1 |
Gene ID: MGYG000003073_7_21
Type: TC
Location: 21742 - 22278 (-)
Type: TC
Location: 21742 - 22278 (-)
Gene ID: MGYG000003073_7_22
Type: CAZyme
Location: 22419 - 23867 (-)
Type: CAZyme
Location: 22419 - 23867 (-)
Gene ID: MGYG000003073_7_23
Type: TF
Location: 24035 - 25027 (-)
Type: TF
Location: 24035 - 25027 (-)
Gene ID: MGYG000003073_7_24
Type: CAZyme
Location: 25142 - 27733 (+)
Type: CAZyme
Location: 25142 - 27733 (+)
Gene ID: MGYG000003073_7_25
Type: TF
Location: 27899 - 28753 (+)
Type: TF
Location: 27899 - 28753 (+)
Gene ID: MGYG000003073_7_26
Type: STP
Location: 29098 - 29778 (-)
Type: STP
Location: 29098 - 29778 (-)
Gene ID: MGYG000003073_7_27
Type: TC
Location: 30216 - 32984 (+)
Type: TC
Location: 30216 - 32984 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900546085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.