Cluster: MGYG000003072_CGC99
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000003072
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003072_25 | MGYG000003072_25_31 | 35058 | 38204 | - | GH38 |
| CAZyme | MGYG000003072_25 | MGYG000003072_25_32 | 38201 | 40513 | - | GH3 |
| TF | MGYG000003072_25 | MGYG000003072_25_33 | 40559 | 42778 | - | HTH_AraC |
| TC | MGYG000003072_25 | MGYG000003072_25_34 | 42954 | 44591 | - | 3.A.1.1.10 |
| TC | MGYG000003072_25 | MGYG000003072_25_35 | 44721 | 45629 | - | 3.A.1.1.10 |
| TC | MGYG000003072_25 | MGYG000003072_25_36 | 45645 | 46622 | - | 3.A.1.1.10 |
| CAZyme | MGYG000003072_25 | MGYG000003072_25_37 | 47121 | 48533 | - | GH29 |
| CAZyme | MGYG000003072_25 | MGYG000003072_25_38 | 49549 | 50607 | - | GH179 |
| pfam | MGYG000003072_25 | MGYG000003072_25_39 | 50901 | 51767 | - | AP_endonuc_2 |
| CAZyme | MGYG000003072_25 | MGYG000003072_25_40 | 52035 | 53816 | - | GH35 |
| CAZyme | MGYG000003072_25 | MGYG000003072_25_41 | 53818 | 55278 | - | GH29 |
| TC | MGYG000003072_25 | MGYG000003072_25_42 | 55309 | 56073 | - | 9.B.158.1.1 |
| CAZyme | MGYG000003072_25 | MGYG000003072_25_43 | 56901 | 59684 | - | GH3 |
Gene ID: MGYG000003072_25_31
Type: CAZyme
Location: 35058 - 38204 (-)
Type: CAZyme
Location: 35058 - 38204 (-)
Gene ID: MGYG000003072_25_32
Type: CAZyme
Location: 38201 - 40513 (-)
Type: CAZyme
Location: 38201 - 40513 (-)
Gene ID: MGYG000003072_25_33
Type: TF
Location: 40559 - 42778 (-)
Type: TF
Location: 40559 - 42778 (-)
Gene ID: MGYG000003072_25_34
Type: TC
Location: 42954 - 44591 (-)
Type: TC
Location: 42954 - 44591 (-)
Gene ID: MGYG000003072_25_35
Type: TC
Location: 44721 - 45629 (-)
Type: TC
Location: 44721 - 45629 (-)
Gene ID: MGYG000003072_25_36
Type: TC
Location: 45645 - 46622 (-)
Type: TC
Location: 45645 - 46622 (-)
Gene ID: MGYG000003072_25_37
Type: CAZyme
Location: 47121 - 48533 (-)
Type: CAZyme
Location: 47121 - 48533 (-)
Gene ID: MGYG000003072_25_38
Type: CAZyme
Location: 49549 - 50607 (-)
Type: CAZyme
Location: 49549 - 50607 (-)
Gene ID: MGYG000003072_25_39
Type: pfam
Location: 50901 - 51767 (-)
Type: pfam
Location: 50901 - 51767 (-)
Gene ID: MGYG000003072_25_40
Type: CAZyme
Location: 52035 - 53816 (-)
Type: CAZyme
Location: 52035 - 53816 (-)
Gene ID: MGYG000003072_25_41
Type: CAZyme
Location: 53818 - 55278 (-)
Type: CAZyme
Location: 53818 - 55278 (-)
Gene ID: MGYG000003072_25_42
Type: TC
Location: 55309 - 56073 (-)
Type: TC
Location: 55309 - 56073 (-)
Gene ID: MGYG000003072_25_43
Type: CAZyme
Location: 56901 - 59684 (-)
Type: CAZyme
Location: 56901 - 59684 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Paenibacillales
Family
Paenibacillaceae
Genus
Paenibacillus
Species
Paenibacillus amylolyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.