Cluster: MGYG000003072_CGC33
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003072
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003072_6 | MGYG000003072_6_6 | 7898 | 9373 | + | GH32 |
| TC | MGYG000003072_6 | MGYG000003072_6_7 | 9400 | 11382 | + | 4.A.1.2.12 |
| NULL(UNKNOWN) | MGYG000003072_6 | MGYG000003072_6_8 | 11804 | 12199 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003072_6 | MGYG000003072_6_9 | 12331 | 14055 | - | CBM46 | GH5_4 |
| pfam | MGYG000003072_6 | MGYG000003072_6_10 | 14316 | 15146 | + | Amidohydro_2 |
| CAZyme | MGYG000003072_6 | MGYG000003072_6_11 | 15386 | 16828 | + | GH1 |
| pfam | MGYG000003072_6 | MGYG000003072_6_12 | 17196 | 18083 | + | PRD | PRD | CAT_RBD |
| TC | MGYG000003072_6 | MGYG000003072_6_13 | 18295 | 20184 | + | 4.A.1.2.11 |
| TC | MGYG000003072_6 | MGYG000003072_6_14 | 20673 | 22142 | + | 3.A.1.121.1 |
| TC | MGYG000003072_6 | MGYG000003072_6_15 | 22285 | 22875 | - | 3.A.1.25.4 |
| TC | MGYG000003072_6 | MGYG000003072_6_16 | 22988 | 23842 | + | 3.A.1.26.7 |
| TC | MGYG000003072_6 | MGYG000003072_6_17 | 23827 | 25596 | + | 3.A.1.25.6 |
Gene ID: MGYG000003072_6_6
Type: CAZyme
Location: 7898 - 9373 (+)
Type: CAZyme
Location: 7898 - 9373 (+)
Gene ID: MGYG000003072_6_7
Type: TC
Location: 9400 - 11382 (+)
Type: TC
Location: 9400 - 11382 (+)
Gene ID: MGYG000003072_6_8
Type:
Location: 11804 - 12199 (+)
Type:
Location: 11804 - 12199 (+)
Gene ID: MGYG000003072_6_9
Type: CAZyme
Location: 12331 - 14055 (-)
Type: CAZyme
Location: 12331 - 14055 (-)
Gene ID: MGYG000003072_6_10
Type: pfam
Location: 14316 - 15146 (+)
Type: pfam
Location: 14316 - 15146 (+)
Gene ID: MGYG000003072_6_11
Type: CAZyme
Location: 15386 - 16828 (+)
Type: CAZyme
Location: 15386 - 16828 (+)
Gene ID: MGYG000003072_6_12
Type: pfam
Location: 17196 - 18083 (+)
Type: pfam
Location: 17196 - 18083 (+)
Gene ID: MGYG000003072_6_13
Type: TC
Location: 18295 - 20184 (+)
Type: TC
Location: 18295 - 20184 (+)
Gene ID: MGYG000003072_6_14
Type: TC
Location: 20673 - 22142 (+)
Type: TC
Location: 20673 - 22142 (+)
Gene ID: MGYG000003072_6_15
Type: TC
Location: 22285 - 22875 (-)
Type: TC
Location: 22285 - 22875 (-)
Gene ID: MGYG000003072_6_16
Type: TC
Location: 22988 - 23842 (+)
Type: TC
Location: 22988 - 23842 (+)
Gene ID: MGYG000003072_6_17
Type: TC
Location: 23827 - 25596 (+)
Type: TC
Location: 23827 - 25596 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Paenibacillales
Family
Paenibacillaceae
Genus
Paenibacillus
Species
Paenibacillus amylolyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.