Cluster: MGYG000003072_CGC31
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000003072
- CGC Family ID: CGCFAM_05630
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003072_5 | MGYG000003072_5_143 | 157341 | 160124 | - | GH38 |
| pfam | MGYG000003072_5 | MGYG000003072_5_144 | 160121 | 163300 | - | Glyco_hydro_42 |
| CAZyme | MGYG000003072_5 | MGYG000003072_5_145 | 163297 | 164616 | - | GH125 |
| CAZyme | MGYG000003072_5 | MGYG000003072_5_146 | 164872 | 168078 | - | GH38 |
| CAZyme | MGYG000003072_5 | MGYG000003072_5_147 | 168083 | 170440 | - | GH3 |
| TC | MGYG000003072_5 | MGYG000003072_5_148 | 170474 | 171394 | - | 3.A.1.1.29 |
| TC | MGYG000003072_5 | MGYG000003072_5_149 | 171418 | 172347 | - | 3.A.1.1.10 |
| STP | MGYG000003072_5 | MGYG000003072_5_150 | 172425 | 173897 | - | SBP_bac_1 |
| TF | MGYG000003072_5 | MGYG000003072_5_151 | 174179 | 175702 | - | HTH_AraC |
| TC | MGYG000003072_5 | MGYG000003072_5_152 | 175695 | 177524 | - | 9.B.33.1.1 |
| CAZyme | MGYG000003072_5 | MGYG000003072_5_153 | 177737 | 180571 | + | GH85 |
| TC | MGYG000003072_5 | MGYG000003072_5_154 | 180711 | 182288 | - | 4.C.1.1.7 |
Gene ID: MGYG000003072_5_143
Type: CAZyme
Location: 157341 - 160124 (-)
Type: CAZyme
Location: 157341 - 160124 (-)
Gene ID: MGYG000003072_5_144
Type: pfam
Location: 160121 - 163300 (-)
Type: pfam
Location: 160121 - 163300 (-)
Gene ID: MGYG000003072_5_145
Type: CAZyme
Location: 163297 - 164616 (-)
Type: CAZyme
Location: 163297 - 164616 (-)
Gene ID: MGYG000003072_5_146
Type: CAZyme
Location: 164872 - 168078 (-)
Type: CAZyme
Location: 164872 - 168078 (-)
Gene ID: MGYG000003072_5_147
Type: CAZyme
Location: 168083 - 170440 (-)
Type: CAZyme
Location: 168083 - 170440 (-)
Gene ID: MGYG000003072_5_148
Type: TC
Location: 170474 - 171394 (-)
Type: TC
Location: 170474 - 171394 (-)
Gene ID: MGYG000003072_5_149
Type: TC
Location: 171418 - 172347 (-)
Type: TC
Location: 171418 - 172347 (-)
Gene ID: MGYG000003072_5_150
Type: STP
Location: 172425 - 173897 (-)
Type: STP
Location: 172425 - 173897 (-)
Gene ID: MGYG000003072_5_151
Type: TF
Location: 174179 - 175702 (-)
Type: TF
Location: 174179 - 175702 (-)
Gene ID: MGYG000003072_5_152
Type: TC
Location: 175695 - 177524 (-)
Type: TC
Location: 175695 - 177524 (-)
Gene ID: MGYG000003072_5_153
Type: CAZyme
Location: 177737 - 180571 (+)
Type: CAZyme
Location: 177737 - 180571 (+)
Gene ID: MGYG000003072_5_154
Type: TC
Location: 180711 - 182288 (-)
Type: TC
Location: 180711 - 182288 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Paenibacillales
Family
Paenibacillaceae
Genus
Paenibacillus
Species
Paenibacillus amylolyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.